DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and Klp61F

DIOPT Version :10

Sequence 1:NP_511125.2 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_476818.1 Gene:Klp61F / 38135 FlyBaseID:FBgn0004378 Length:1066 Species:Drosophila melanogaster


Alignment Length:740 Identity:174/740 - (23%)
Similarity:300/740 - (40%) Gaps:172/740 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 EFHFDHAFPATISQDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEIL----- 106
            :|.||.:|.....|.::|..::.||::::|.|:.||..|||||||||:::|......|:.     
  Fly    63 KFTFDRSFGPESKQCDVYSVVVSPLIEEVLNGYNCTVFAYGQTGTGKTHTMVGNETAELKSSWED 127

  Fly   107 PEHLGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLG------------STPHM 159
            ...:||:||||..:|:.:...:......|    |::|:|||:..|||.            ||...
  Fly   128 DSDIGIIPRALSHLFDELRMMEVEYTMRI----SYLELYNEELCDLLSTDDTTKIRIFDDSTKKG 188

  Fly   160 PMVAARCQRCTCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAI--VTIHVKSK------ 216
            .::....:.   :|:||:.|::.:||.|...|:...|.||:.|||||.:  :.:|::..      
  Fly   189 SVIIQGLEE---IPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGED 250

  Fly   217 -THHSRMNIVDLAGSEGVRRTGHE-GVARQEGVNINLGLLSINKVVMSMAAGHTVIPYRDSVLTT 279
             ....::|:|||||||.|.:.|:| |:..:|.||||..||::.:|:.::......:|||:|.||.
  Fly   251 MLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRAPHVPYRESKLTR 315

  Fly   280 VLQASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKKLRLNP-------------------- 324
            :||.||..::..:.:|.|||...|:.||||||.:...||.::..|                    
  Fly   316 LLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKLTKKTVLKEYTEEID 380

  Fly   325 -----MQVARQKQS--LAART-----------THVFRQALCTSTAIKSNAANHNSIV--VPKSKY 369
                 :..||.|..  ||..|           .....:.:....|:|....|...|.  |..|..
  Fly   381 KLKRDLMAARDKNGIYLAEETYGEITLKLESQNRELNEKMLLLKALKDELQNKEKIFSEVSMSLV 445

  Fly   370 STTKPLSAV---LHRTRSELGMT----PKAKKRARELLELEETTLELSSIHIQDSSLSLLG---- 423
            ..|:.|...   |..|:..|.:|    .|.|:|.:|..||..:.::...: :...:..:|.    
  Fly   446 EKTQELKKTEENLLNTKGTLLLTKKVLTKTKRRYKEKKELVASHMKTEQV-LTTQAQEILAAADL 509

  Fly   424 -------FHSDSDKDRHLMPPPTGQEPRQASSQ-------NSTLMG----IVEETEPKESSKVQQ 470
                   .|...::.|.|     .::.|::..|       |..::|    :.::.:.....::.|
  Fly   510 ATDDTHQLHGTIERRREL-----DEKIRRSCDQFKDRMQDNLEMIGGSLNLYQDQQAALKEQLSQ 569

  Fly   471 SMVAPTVPTTVRCQLFNTTISPISLRASSSQRELSGIQPMEETVVASPQQPC-----LRRSVRLA 530
            .||             |::.....|..:||:    .|:.::|....|.|...     |...|...
  Fly   570 EMV-------------NSSYVSQRLALNSSK----SIEMLKEMCAQSLQDQTNLHNKLIGEVMKI 617

  Fly   531 SSMRSQNYGAIPKVM------------------------NLRRSTRLAGIREHATSVVVKNETDA 571
            |...||.:  :.|:|                        |.|....|..::|...:::..:....
  Fly   618 SDQHSQAF--VAKLMEQMQQQQLLMSKEIQTNLQVIEENNQRHKAMLDSMQEKFATIIDSSLQSV 680

  Fly   572 IPHLRSTVQKKRTRNVKPAPKAWMANNTKCFL----------DLLNNGNVKQLQEIPGIGPKSAF 626
            ..|.:...:|.........|.|....|.:..|          |.|....:.|:::|..:..|::.
  Fly   681 EEHAKQMHKKLEQLGAMSLPDAEELQNLQEELANERALAQQEDALLESMMMQMEQIKNLRSKNSI 745

  Fly   627 SLALH-----RSRLGCFENLFQVKS 646
            |:::|     .|||.....:..:||
  Fly   746 SMSVHLNKMEESRLTRNHRIDDIKS 770

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_511125.2 KISc 8..318 CDD:276812 99/297 (33%)
ComEA 606..>645 CDD:441164 9/43 (21%)
Klp61FNP_476818.1 KISc_BimC_Eg5 17..365 CDD:276815 102/308 (33%)
SMC_prok_B <408..728 CDD:274008 56/344 (16%)
SMC_prok_B <651..>921 CDD:274008 22/120 (18%)
Microtub_bind 923..>1004 CDD:464048
Blue background indicates that the domain is not in the aligned region.

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