DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and Kif18b

DIOPT Version :10

Sequence 1:NP_511125.2 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001427099.1 Gene:Kif18b / 303575 RGDID:1310360 Length:841 Species:Rattus norvegicus


Alignment Length:742 Identity:196/742 - (26%)
Similarity:309/742 - (41%) Gaps:190/742 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SAVRIAVREAP--YRQFLGRREPSVVQ-----------------FP--PWS--------DGKSLI 42
            |.||:.||..|  .::...:|.| |:|                 ||  .||        .||.| 
  Rat     8 SVVRVVVRVRPPTPKELESQRRP-VIQVVDERMLVFDPEECDGGFPGLKWSGSLSGPKKKGKDL- 70

  Fly    43 VDQNEFHFDHAFPATISQDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEILP 107
                .|.||..|....:|.:::|.....::|..|:|:.|:..|||.||.||:::| :...|:  |
  Rat    71 ----TFVFDRVFSEVATQQDVFQHTTHNILDSFLQGYNCSVFAYGATGAGKTHTM-LGREGD--P 128

  Fly   108 EHLGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLGSTPHMPM-VAARCQRCTC 171
               ||:.....:::.|:.|.||..:  .:|..|::|:|||:.:|||  .|..|: :.....:...
  Rat   129 ---GIMYLTTMELYRRLEACQEEKQ--FEVLISYLEVYNEQIYDLL--EPKGPLTIREDPDKGVV 186

  Fly   172 LP---LHSQADLHHILELGTR---NRRVRPTNMNSNSSRSHAIVTIHVKSK---------THHSR 221
            :|   .|..|....:||:.||   :|...||:.|:.|||||||..|.||.:         ...::
  Rat   187 VPGLSFHQPASAQQLLEMLTRGNCSRTQHPTDANATSSRSHAIFQIFVKQQDRVPGLTQALRVAK 251

  Fly   222 MNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMA-----AGHTVIPYRDSVLTTVL 281
            |:::||||||....|..:|...:||.|||..||::..|:.::|     ..|  :|||||.||.:|
  Rat   252 MSLIDLAGSERASSTHAKGERLREGANINRSLLALINVLNALADAKGRKSH--VPYRDSKLTRLL 314

  Fly   282 QASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKKLRLNPMQVARQKQSLAARTTHVFRQAL 346
            :.|:........:|.:||......:|.:||::...||::||                        
  Rat   315 KDSIGGNCRTVMIAAVSPSSLTYEDTYNTLKYADRAKEIRL------------------------ 355

  Fly   347 CTSTAIKSNAANHNSIVVPKSKYST-TKPLSAVLHRTRSELGMTPKAKKRARELLELEETTL--- 407
                .:|||..:.:..:   |:|:| .:.|.|.:...|.:| .|.:|..:|.:....:...|   
  Rat   356 ----TLKSNVISLDHHI---SQYATICQQLQAEVAALREKL-QTYEAGAQALQQRSPQPPKLSIP 412

  Fly   408 -ELSSIHIQ--DSSLSLL-GFHS--DSDKDRHLMPPPTGQEPRQASSQNSTLMGIVEETEPKESS 466
             .|||..:|  .||.|.. .||:  |:.::..|.....||             |.|||..|::..
  Rat   413 QNLSSSPLQPGHSSQSCAPEFHAKYDAPQEESLGTDSQGQ-------------GTVEENAPEQEQ 464

  Fly   467 KVQQ-----SMVAPTVP----TTVRCQLFNTTISPISLRASSS-----------QRELSGIQP-- 509
            ..|.     .|..|.:|    .||:.:......|...|.|..|           ||:.|.:|.  
  Rat   465 PPQDKQFPTQMPEPNLPGSPCPTVQAKQGMNQHSLQRLDAEHSKQLALRVLRLAQRQYSLLQAAN 529

  Fly   510 -----------------MEETV---VASPQQPCLRRSVRLASSMRSQNYGAIPKVMNLR-----R 549
                             :||::   ..||:.|.|.|.:.||..:.|:: ...|..::||     .
  Rat   530 LLTPDMISEFETLQQLVLEESMEHGAESPRSPGLARGIPLAQELCSES-SECPLSLSLRPACSQE 593

  Fly   550 STRLAG--IREHATSVVVKNETDAIP----------HLRSTVQKKRTRNVK-----PAPKAWMAN 597
            |:|..|  .|..|..:.....|..||          ..:.|.:|||..|::     |||...|..
  Rat   594 SSRYCGPVTRTMAKQLSGLTHTLGIPLAPDCTSDKTSQKPTKEKKRKLNLEEPGSLPAPSVEMKR 658

  Fly   598 NTKCFLDLLNNGNVKQLQEIPGIGPKS 624
            ..:.||..|..|::.::|  |...|::
  Rat   659 QRQSFLPCLRRGSLPKIQ--PSSEPRT 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_511125.2 KISc 8..318 CDD:276812 108/359 (30%)
ComEA 606..>645 CDD:441164 5/19 (26%)
Kif18bNP_001427099.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 396..496 26/112 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 617..700 18/69 (26%)
Nuclear localization signal. /evidence=ECO:0000250 633..641 4/7 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 777..803
Blue background indicates that the domain is not in the aligned region.

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