DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and Kif21b

DIOPT Version :10

Sequence 1:NP_511125.2 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_063128266.1 Gene:Kif21b / 289397 RGDID:1306206 Length:1635 Species:Rattus norvegicus


Alignment Length:628 Identity:170/628 - (27%)
Similarity:262/628 - (41%) Gaps:151/628 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEGAKLSAVRIAVREAPYRQFLGRRE-------PSVVQFPPWSDGKSLIVDQNEFHFDHAFPATI 58
            |.|.....|::|||..|.   |.:.:       .||....|    :.|:.....|.:|..|....
  Rat     1 MAGQGDCCVKVAVRIRPQ---LSKEKIEGCHICTSVTPGEP----QVLLGKDKAFTYDFVFDLDT 58

  Fly    59 SQDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFER 123
            .|:::|...:..|::...||:..|.|||||||.||:|:||.........|..||:|||:..:|..
  Rat    59 WQEQIYSTCVSKLIEGCFEGYNATVLAYGQTGAGKTYTMGTGFDTVTSEEEQGIIPRAIAHLFRG 123

  Fly   124 VTARQENNKD------AIQVYASFIEIYNEKPFDLLGST--PHMPMVAARCQR------------ 168
            :..|:...::      ..:|.|.|:|:|||:..||..||  |.     ||.:|            
  Rat   124 IDERKRRAQEQGVTGPEFKVSAQFLELYNEEILDLFDSTRDPD-----ARHRRSNIKIHEDANGG 183

  Fly   169 -----CTCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHV--------------- 213
                 .|...::||.:|...|:.|..:|....|.||..|||||||.|||:               
  Rat   184 IYTTGVTSRLINSQEELIQCLKQGALSRTTASTQMNVQSSRSHAIFTIHLCQMRVCAQPDLVNET 248

  Fly   214 -------------KSKTHHSRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVV----- 260
                         :.:|..::.:.|||||||.::|||..|...:||::||.|||::..|:     
  Rat   249 VTGLPDGTAPTGTEYETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGD 313

  Fly   261 MSMAAGHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKKLRLNPM 325
            .|....|  :|||||.||.:||.||...|....:||:||...|..|||:||::...|:.:: |.:
  Rat   314 QSKKVVH--VPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANRARNIK-NKV 375

  Fly   326 QVARQK--QSLAARTTHVFRQAL------CTSTAIKSNAANHNSIVVPKSKYSTTKPLSAVLHRT 382
            .|.:.|  |.::|....:.|..:      .....|..:.|         ..||.....:|:|.:.
  Rat   376 VVNQDKTSQQISALRAEIARLQMELMEYKAGKRVIGEDGA---------EGYSDLFRENAMLQKE 431

  Fly   383 RSELGMTPKAKKRARELLELEETTLELSSIHIQDSSLSLLGFHSDSDKDRHLMPPPTGQEPRQAS 447
            ...|.:..||.:.|.:.:....|  :|.|   |:::| ||....|            |.|...|.
  Rat   432 NGALRLRVKAMQEAIDAINNRVT--QLMS---QEANL-LLAKAGD------------GNEAIGAL 478

  Fly   448 SQNSTLMGIVEETEPK--ESSKVQQSMVAPTVPTTVRCQLFNTTISPISLRAS-----------S 499
            .||  .:..:||...|  ||..:.:|:.......:.|        :|.||.||           |
  Rat   479 IQN--YIREIEELRTKLLESEAMNESLRRSLSRASAR--------NPYSLGASPAGPAFGGSPAS 533

  Fly   500 SQRELSGI-----QPME--------ETVVASPQQPCLRRSVRL 529
            |..:.|.:     |.:|        :...:||::...::..:|
  Rat   534 SMEDASEVIRRAKQDLERLKKKEVRQRRKSSPEKEAFKKRAKL 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_511125.2 KISc 8..318 CDD:276812 118/374 (32%)
ComEA 606..>645 CDD:441164
Kif21bXP_063128266.1 None
Blue background indicates that the domain is not in the aligned region.

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