DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and kif11

DIOPT Version :9

Sequence 1:NP_001285129.1 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_775368.2 Gene:kif11 / 195818 ZFINID:ZDB-GENE-020426-1 Length:1062 Species:Danio rerio


Alignment Length:722 Identity:185/722 - (25%)
Similarity:302/722 - (41%) Gaps:176/722 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GRREPSVVQFPPWS-----DGKSLIV--DQNE------------------FHFDHAFPATISQDE 62
            ||....||:..|::     .|...:|  |||.                  :.||..|..:..|.|
Zfish    15 GRNIQVVVRCRPFNTVERKSGSHTVVECDQNRKEVIMRTGGATDKAARKTYTFDMVFGPSAKQIE 79

  Fly    63 MYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSM--GMTPPGEILPEH---LGILPRALGDIFE 122
            :|::::.|::|:::.|:.||..|||||||||:::|  ..:|..|...|.   .||:||.|..|||
Zfish    80 VYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTMEGDRSPNEEFTWEEDPLAGIIPRTLHQIFE 144

  Fly   123 RVTARQENNKDAIQVYASFIEIYNEKPFDLLGSTPHMPMVAARCQ--------------RCTCLP 173
            :::    ||.....|..|.:|||||:.||||...|.   |..|.|              ....:.
Zfish   145 KLS----NNGTEFSVKVSLLEIYNEELFDLLSPAPD---VTERLQLFDDPRNKRGVTIKGLEEIT 202

  Fly   174 LHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAI--VTIHVKSKT-------HHSRMNIVDLAG 229
            :|::.:::.|||.|...|:...|.||:.|||||::  ||||:|..|       ...::|:|||||
Zfish   203 VHNKNEVYQILERGAAKRKTASTLMNAYSSRSHSVFSVTIHMKEITLDGEELVKIGKLNLVDLAG 267

  Fly   230 SEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQSYLTFL 294
            ||.:.|:|......:|..|||..||::.:|:.::......:|||:|.||.:||.||..::..:.:
Zfish   268 SENIGRSGAVDKRAREAGNINQSLLTLGRVIKALVERGPHVPYRESKLTRILQDSLGGRTKTSII 332

  Fly   295 ACISPHQCDLSETLSTLRFGTSAKKLRLNP----------------MQVARQKQSLAA-RTTH-V 341
            |.:||...:|.||||||.:...||.:...|                .::.|.|:.||| |..| |
Zfish   333 ATVSPASINLEETLSTLDYANRAKSIMNKPEVNQKLTKRTLIKEYTEEIERLKRDLAATRDKHGV 397

  Fly   342 FRQALCTSTAIKSNAANHNSIVVPKSKYST--TKPLSAVLHRTRSELGMTPKAKKRARELLELEE 404
            :...        .|....|..:|.:.:..|  |:.::|:....:..:.:...:|::      ||:
Zfish   398 YLSV--------DNYETLNGKIVSQEEQITEYTERIAAMEEELKKIIDLFTDSKQK------LEQ 448

  Fly   405 TTLELSSIHIQDSSLSLLGFHSDSDKDRHLMPPPTGQEPRQASSQNSTLMGIVEETEPKESSKVQ 469
            .|.:|     ||.:..|...|.|..:.||                                 ::.
Zfish   449 CTEDL-----QDKNQRLEEAHKDLSETRH---------------------------------RLN 475

  Fly   470 QSMVAPTVPTTVRCQLFNTTISPISLRASSSQRELSGIQ---------PMEETVVASPQQPCLR- 524
            |.....|...|....|:||....:| .|.:|.:::.|:.         .:..:.|......|:. 
Zfish   476 QEEFISTQLQTNESHLYNTADQLLS-TAEASTQDVGGLHAKLQRKKDVELHNSKVQESFSQCMEN 539

  Fly   525 --RSVRLASSMRSQNYGAIPKVMNLRRSTRLAGIREHATSVVVKNETDAIPHLRSTVQKKRTRNV 587
              .|::.:...:||.:.|   :::..||:  .|...:....|.|....|:....|:::......|
Zfish   540 CYNSMQTSLKEQSQKHAA---MIDYYRSS--VGELLNTNGKVFKETLSAVCESYSSIKGAVGEGV 599

  Fly   588 KPAPKAWMANNTKCFLDLLNN------------GNVKQLQEIPGIGPKSAFSL------ALHRSR 634
            :.. |..:.|..|...|..|:            ..|...|.:|||  :|..|:      .||:  
Zfish   600 ERC-KEQVLNQEKLSQDAQNSILEILDEHKQHLEEVLVAQAVPGI--RSVMSMNDNLKQTLHK-- 659

  Fly   635 LGCFENL 641
               :.||
Zfish   660 ---YHNL 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_001285129.1 KISc 8..325 CDD:214526 119/370 (32%)
KISc 8..318 CDD:276812 116/347 (33%)
ComEA 540..648 CDD:224472 25/120 (21%)
kif11NP_775368.2 KISc_BimC_Eg5 15..367 CDD:276815 119/358 (33%)
KISc 17..365 CDD:214526 117/354 (33%)
Microtub_bind 926..1061 CDD:290642
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594330
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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