DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and klp-19

DIOPT Version :9

Sequence 1:NP_001285129.1 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_499742.1 Gene:klp-19 / 176750 WormBaseID:WBGene00002229 Length:1083 Species:Caenorhabditis elegans


Alignment Length:774 Identity:192/774 - (24%)
Similarity:323/774 - (41%) Gaps:157/774 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SAVRIAVREAPYRQFLGRREPS----VVQFPPWSDGKSLIVDQN-EFHFDHAFPATISQDEMYQA 66
            :::|:.||..|..   ||....    .|||  :.:.|.:::::: .|.||..|..|..|:.:|:.
 Worm     5 ASLRVVVRARPMN---GRETKEGASRCVQF--YENTKQIVINESATFTFDAVFADTSDQESVYET 64

  Fly    67 LILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFERVTARQENN 131
            ..|||:|::..||..|.|||||||:||:|:||............||:||.:..:|:|:...:...
 Worm    65 TALPLLDRIFAGFNATVLAYGQTGSGKTYTMGTEDNVGTDEMRRGIIPRLVSALFQRIMNTEAPE 129

  Fly   132 KDAIQVYASFIEIYNEKPFDLLGSTPHMPMVAARCQRCTCLPLHS--QADLHHILE---LGTRNR 191
            ..|:.|  |..|:|.:..:|||........|....:.||.:.|.:  ..||...|:   :|...|
 Worm   130 SFAVTV--SMFEVYGDNVYDLLRPDKVKLNVHGDEKNCTVVNLTAVPVIDLKGALKQLAVGCHYR 192

  Fly   192 RVRPTNMNSNSSRSHAIVTIHVK-------SKTHHSRMNIVDLAGSEGVRRTGHEGVARQEGVNI 249
            ....|.||:.||||||:.|:.|:       .....:::.:|||||||.:::|..||...:||:||
 Worm   193 TKAETAMNAMSSRSHAVFTVFVEKTATAECDSAFSAKLQLVDLAGSERLKKTEAEGNRMKEGINI 257

  Fly   250 NLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFG 314
            |.|||.:::|:.::|.....||||:||:|.|||.||...|:..|||||||...:..|||:|||:.
 Worm   258 NGGLLILSQVIAALATKQKHIPYRNSVITRVLQDSLGGNSFTVFLACISPADSNSQETLNTLRYA 322

  Fly   315 TSAKKLRLNPM---------------QVAR-QKQSLAARTTHVFRQALCTSTAIKSNAANHNSIV 363
            ..||:::..|:               |:.| ||::..      .:|.:..: .::.|.|| ||..
 Worm   323 DRAKQIKNKPIVNKNPKAEEIAILQAQLKRLQKENAD------LKQGIAPA-EVRFNDAN-NSAE 379

  Fly   364 VPKSKYSTTKPLSAVLHRTRSE----LGMTPKAKKRAR----------------------ELLEL 402
            :...|....:....:..|...:    :.|:...:|.:|                      |:|:.
 Worm   380 ILSLKEEVVRKTEQLKERAMKQSECIIRMSALTQKNSRLEEDKAKLQSMLTDVRNTVLNEEMLDA 444

  Fly   403 EET----------TLELSSIHIQDSSLSLLGFHSDSDKDRHLMPPPTGQ------------EPRQ 445
            .|.          |.|.:::...|:..:.||...|:..|...:|....:            |.||
 Worm   445 AEVVRSIQQVVGDTEESTTLADDDNDETALGGQDDTIYDTERLPELQAELDDLEKQIAMKDENRQ 509

  Fly   446 ASSQNSTLMGIVEETEPKESSKVQQSMVAPTVPTTV-RCQLFNTTISPISLRASSSQRELSGI-- 507
            .:....  ...:|..:.:||.|.|..:....:.|.: :.:.....::..:..|...:::|..:  
 Worm   510 KALDEQ--RAFIEAMQQRESEKTQLVVRISELETEMNKLRQEGKKVTTAAKLAEERRQKLKDLER 572

  Fly   508 QPMEETVVASPQQPCLRRSVRLASSMRSQNYGAIPKVMNLRRSTRLAGIREHAT----------- 561
            |..|:..|.:..:.......|:..:::...    .::.|| ::.||..:||...           
 Worm   573 QHAEDKKVLNDMKKLQETRRRMEETLKKTE----DELKNL-KTQRLRLLREQRAEASKFQAFKQK 632

  Fly   562 ---------SVVVKNETDAIPHLRSTVQKKRTRNVKPAPKAWMANNTKCFLDLLNNGNVKQLQEI 617
                     |.:.|.|.|.....|.|.||.....:: ..:|..||.|...|: |...|.|.    
 Worm   633 HEREMAQMKSKLQKRENDVAIQKRMTDQKLTVLQMR-LTEANRANKTLRELN-LKRANRKS---- 691

  Fly   618 PGIGPKSAFSLA----------------------LHRSRLGCFENLFQVKSLPIWSGNK 654
               .|.:|.:|.                      |.|.|....:|:..|:|:....|.:
 Worm   692 ---SPTNASALQNMIEEELEHEMCAQRSHWLCEDLRRQRHDLMQNINTVESMKFEGGKR 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_001285129.1 KISc 8..325 CDD:214526 118/333 (35%)
KISc 8..318 CDD:276812 116/326 (36%)
ComEA 540..648 CDD:224472 31/149 (21%)
klp-19NP_499742.1 KISc 6..326 CDD:276812 116/326 (36%)
SMC_prok_A <342..621 CDD:274009 47/293 (16%)
Smc <481..825 CDD:224117 49/283 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0244
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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