DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nod and klp-17

DIOPT Version :10

Sequence 1:NP_511125.2 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_496446.3 Gene:klp-17 / 174750 WormBaseID:WBGene00002227 Length:471 Species:Caenorhabditis elegans


Alignment Length:351 Identity:104/351 - (29%)
Similarity:158/351 - (45%) Gaps:73/351 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VRIAVREAPYRQFLGRREPSVVQFPPWSDGKS--LIVDQNE------------FHFDHAFPATIS 59
            :|:|:|...:.:                ||.|  .|:.|||            :.|:|.|....:
 Worm   146 IRVAIRVRDFER----------------DGSSNFSIISQNEVQLQQTTGQSNTYSFEHVFFPPTA 194

  Fly    60 QDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFERV 124
            |..:: ..|..|:...|.|.....:|||.||:||:::|    .||...:..|::|||:..:.|  
 Worm   195 QSGVF-GEIKELIMCALHGKNVCLIAYGPTGSGKTFTM----RGEDSADSEGVIPRAIRFMLE-- 252

  Fly   125 TARQENNKDAIQV------YASFIEIYNEKPFDLL-----------GSTPHMPMVAARCQRCTCL 172
                ::.:|...:      .|||||:|||:.:|||           ||..::..:..       :
 Worm   253 ----QSKRDLAMIGWNYKFQASFIEVYNEEVYDLLDGKQKLEVKINGSKTNVVGLKK-------I 306

  Fly   173 PLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSKTHHSRM-----NIVDLAGSEG 232
            .:.:.:|:..||.|....|.|..|..|.:|||||||..|.|..:.....|     |:|||||||.
 Worm   307 EIGNISDVDVILNLADSQRSVASTASNEHSSRSHAIFQIFVDGQNASGEMVQCCLNLVDLAGSER 371

  Fly   233 VRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQSYLT-FLAC 296
            .:.|...|....|..|||..|.::.|.:.:.....:.:|||||.||.||:..|.|.|..| |:|.
 Worm   372 AKETQARGKQFTELTNINQSLSTLKKCIRAQMTKMSHVPYRDSKLTMVLREYLGAGSSKTMFIAH 436

  Fly   297 ISPHQCDLSETLSTLRFGTSAKKLRL 322
            .:|.  |::||..||.|.:..:...|
 Worm   437 ANPR--DVAETKRTLEFTSELRSTNL 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_511125.2 KISc 8..318 CDD:276812 103/345 (30%)
ComEA 606..>645 CDD:441164
klp-17NP_496446.3 Mplasa_alph_rch <11..146 CDD:275316 104/351 (30%)
PRK03992 70..>116 CDD:179699
KISc 145..464 CDD:214526 104/351 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.