DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and Kif5b

DIOPT Version :9

Sequence 1:NP_001285129.1 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_032474.2 Gene:Kif5b / 16573 MGIID:1098268 Length:963 Species:Mus musculus


Alignment Length:734 Identity:183/734 - (24%)
Similarity:307/734 - (41%) Gaps:187/734 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VRIAVREAPYRQF-LGRREPSVVQFPPWSDGK-SLIVDQNEFHFDHAFPATISQDEMYQALILPL 71
            :::..|..|..:. :.|.:..|.:|    .|: ::::....:.||..|.::.||:::|......:
Mouse     9 IKVMCRFRPLNESEVNRGDKYVAKF----QGEDTVMIASKPYAFDRVFQSSTSQEQVYNDCAKKI 69

  Fly    72 VDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEIL-PEHLGILPRALGDIFERVTARQENNKDAI 135
            |..:|||:..|..|||||.:||:::|    .|::. ||.:||:||.:.|||..:.:..||.:..|
Mouse    70 VKDVLEGYNGTIFAYGQTSSGKTHTM----EGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHI 130

  Fly   136 QVYASFIEIYNEKPFDLLGSTP----------HMPMVAARCQRCTCLPLHSQADLHHILELGTRN 190
            :|  |:.|||.:|..|||..:.          .:|.|....:|..|.|    .::...::.|..|
Mouse   131 KV--SYFEIYLDKIRDLLDVSKTNLSVHEDKNRVPYVKGCTERFVCSP----DEVMDTIDEGKSN 189

  Fly   191 RRVRPTNMNSNSSRSHAIVTIHVKSKTHHS------RMNIVDLAGSEGVRRTGHEGVARQEGVNI 249
            |.|..||||.:|||||:|..|:||.:...:      ::.:|||||||.|.:||.||....|..||
Mouse   190 RHVAVTNMNEHSSRSHSIFLINVKQENTQTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNI 254

  Fly   250 NLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFG 314
            |..|.::..|:.::|.|.|.:|||||.:|.:||.||......|.:.|.||...:.|||.|||.||
Mouse   255 NKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFG 319

  Fly   315 TSAKKLR--------------------------------------LN--------PM--QVARQK 331
            ..||.::                                      ||        |:  |..::|
Mouse   320 QRAKTIKNTVCVNVELTAEQWKKKYEKEKEKNKTLRNTIQWLENELNRWRNGETVPIDEQFDKEK 384

  Fly   332 QSLAARTTHVFRQALCTS----TAI---------------------------KSNAANHNSIVVP 365
            .:|.|.|..  :....||    .|:                           |....|..|.:|.
Mouse   385 ANLEAFTAD--KDIAITSDKPAAAVGMAGSFTDAERRKCEEELAKLYKQLDDKDEEINQQSQLVE 447

  Fly   366 KSK----------YSTTKP---LSAVLHRTRSELGMTPKAKKRARELL---------------EL 402
            |.|          .||.:.   :.|.|:|.::|   ...:|:..:|:|               |:
Mouse   448 KLKTQMLDQEELLASTRRDQDNMQAELNRLQAE---NDASKEEVKEVLQALEELAVNYDQKSQEV 509

  Fly   403 EETT--LELSSIHIQDSSLSLLGFHSDSDKDRHLMPPPTGQEPRQASSQNSTLM------GIV-- 457
            |:.|  .||.|..:...|.:|....::..|.:.:    |..:.::|:...::|:      ||.  
Mouse   510 EDKTKEYELLSDELNQKSATLASIDAELQKLKEM----TNHQKKRAAEMMASLLKDLAEIGIAVG 570

  Fly   458 --EETEPKESSKVQQ---------SMVAPTVPTTV-RCQLFNTTISPISLRASSSQRELSGIQ-- 508
              :..:|:.:..:.:         |.:...|.|.| ||:...:|.:..:.:...:::||:..|  
Mouse   571 NNDVKQPEGTGMIDEEFTVARLYISKMKSEVKTMVKRCKQLESTQTESNKKMEENEKELAACQLR 635

  Fly   509 -PMEETVVASPQ---QPCLRRSVRLASSMRSQNYGAIPKVMNLRRSTRLAGI-REHATSVVVKNE 568
             ...|..:.|..   |...::..:|..|:.|..    .:::.||...::..: :||...|...||
Mouse   636 ISQHEAKIKSLTEYLQNVEQKKRQLEESVDSLG----EELVQLRAQEKVHEMEKEHLNKVQTANE 696

  Fly   569 T-----DAIPHLRSTVQKK 582
            .     ..|...|.|.||:
Mouse   697 VKQAVEQQIQSHRETHQKQ 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_001285129.1 KISc 8..325 CDD:214526 116/380 (31%)
KISc 8..318 CDD:276812 112/327 (34%)
ComEA 540..648 CDD:224472 12/49 (24%)
Kif5bNP_032474.2 KISc_KHC_KIF5 6..325 CDD:276820 114/329 (35%)
KISc 8..332 CDD:214526 114/336 (34%)
DUF4337 <462..>538 CDD:290935 17/78 (22%)
TACC 467..662 CDD:282818 36/201 (18%)
TMPIT 598..>686 CDD:285135 17/91 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 908..963
Globular 915..963
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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