DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nod and Kif21b

DIOPT Version :9

Sequence 1:NP_001285129.1 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001034561.1 Gene:Kif21b / 16565 MGIID:109234 Length:1624 Species:Mus musculus


Alignment Length:677 Identity:173/677 - (25%)
Similarity:268/677 - (39%) Gaps:197/677 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEGAKLSAVRIAVREAPYRQFLGRRE-------PSVVQFPPWSDGKSLIVDQNEFHFDHAFPATI 58
            |.|.....|::|||..|.   |.:.:       .||....|    :.|:.....|.:|..|....
Mouse     1 MAGQGDCCVKVAVRIRPQ---LSKEKIEGCHICTSVTPGEP----QVLLGKDKAFTYDFVFDLDT 58

  Fly    59 SQDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFER 123
            .|:::|...:..|::...||:..|.|||||||.||:|:||.........|..||:|||:..:|..
Mouse    59 WQEQIYSTCVSKLIEGCFEGYNATVLAYGQTGAGKTYTMGTGFDTVTSEEEQGIIPRAIAHLFRG 123

  Fly   124 VTARQENNKD------AIQVYASFIEIYNEKPFDLLGST--PHMPMVAARCQR------------ 168
            :..|:...::      ..:|.|.|:|:|||:..||..||  |.     ||.:|            
Mouse   124 IDERKRRAQEKGVTGPEFKVSAQFLELYNEEILDLFDSTRDPD-----ARHRRSNIKIHEDANGG 183

  Fly   169 -----CTCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHV--------------- 213
                 .|...::||.:|...|:.|..:|....|.||..|||||||.|||:               
Mouse   184 IYTTGVTSRLINSQEELIQCLKQGALSRTTASTQMNVQSSRSHAIFTIHLCQMRVCAQPDLVNET 248

  Fly   214 -------------KSKTHHSRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVV----- 260
                         :.:|..::.:.|||||||.::|||..|...:||::||.|||::..|:     
Mouse   249 VTGLPDGAAPTGTEYETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGD 313

  Fly   261 MSMAAGHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKKLRLNPM 325
            .|....|  :|||||.||.:||.||...|....:||:||...|..|||:||::...|:.::    
Mouse   314 QSKKVVH--VPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANRARNIK---- 372

  Fly   326 QVARQKQSLAARTTHVFRQALCTSTAIKSNAANHNSIVVPKSKYSTTKPLSAV---LHRTRSELG 387
                                              |.:||.:.|  |::.:||:   :.|.:.|| 
Mouse   373 ----------------------------------NKVVVNQDK--TSQQISALRAEIARLQMEL- 400

  Fly   388 MTPKAKKRA-------------RE--LLELEETTLELSSIHIQDSSLSLLGFHSDSDKDRHLMPP 437
            |..||.||.             ||  :|:.|...|.|....:|::      ..:.:::...||..
Mouse   401 MEYKAGKRVIGEDGTEGYSDLFRENAMLQKENGALRLRVKAMQEA------IDAINNRVTQLMSQ 459

  Fly   438 PTGQEPRQASSQNSTLMGIVEE--TEPKESSKVQQSMVAPTVPTTVRCQLFNTTISPISLRASSS 500
            .......:|...|..:..:::.  .|.:|                :|.:|..:.....|||.|.|
Mouse   460 EANLLLAKAGDGNEAIGALIQNYIREIEE----------------LRTKLLESEAMNESLRRSLS 508

  Fly   501 QRELSGIQPMEETVVASPQQPCLRRSVRLASSMRSQNYGAIPKVMNLRRSTRLAGIREHATSVVV 565
            :              ||.:.|     ..|.:|.....:|..|           |...|.|:.|:.
Mouse   509 R--------------ASARNP-----YSLGASPAGPAFGGSP-----------ATSMEDASEVIR 543

  Fly   566 KNETDAIPHLRSTVQKKRTRNVKPAPK 592
            |.:.|.     ..::||..|..:.:|:
Mouse   544 KAKQDL-----ERLKKKEVRQRRKSPE 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_001285129.1 KISc 8..325 CDD:214526 119/381 (31%)
KISc 8..318 CDD:276812 118/374 (32%)
ComEA 540..648 CDD:224472 11/53 (21%)
Kif21bNP_001034561.1 KISc_KIF4 7..372 CDD:276823 119/378 (31%)
KISc 9..378 CDD:214526 121/420 (29%)
Interaction with TRIM3. /evidence=ECO:0000269|PubMed:24086586 401..1100 42/222 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 553..629 4/13 (31%)
PKK 661..795 CDD:289257
JAKMIP_CC3 679..807 CDD:292653
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 837..866
Prefoldin 965..1101 CDD:298833
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1199..1253
WD40 1302..1615 CDD:238121
WD40 1308..>1617 CDD:225201
WD 1 1308..1345
WD40 repeat 1314..1348 CDD:293791
WD 2 1348..1386
WD40 repeat 1353..1389 CDD:293791
WD40 repeat 1409..1452 CDD:293791
WD 3 1412..1450
WD 4 1453..1495
WD40 repeat 1458..1502 CDD:293791
WD 5 1504..1541
WD40 repeat 1511..1543 CDD:293791
WD 6 1545..1584
WD40 repeat 1550..1574 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0244
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.