DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nod and Kif1a

DIOPT Version :10

Sequence 1:NP_511125.2 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_006529218.1 Gene:Kif1a / 16560 MGIID:108391 Length:1800 Species:Mus musculus


Alignment Length:468 Identity:136/468 - (29%)
Similarity:216/468 - (46%) Gaps:69/468 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEGAKLSAVRIAVREAPYR-QFLGRREPSVVQFPPWSDGKSLIVDQNE-------FHFD-----H 52
            |.||   :|::|||..|:. :.:.|....::|.   |...:.||:..:       |.||     |
Mouse     1 MAGA---SVKVAVRVRPFNSREMSRDSKCIIQM---SGSTTTIVNPKQPKETPKSFSFDYSYWSH 59

  Fly    53 AFPATI---SQDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEILPEHLGILP 114
            ..|..|   ||.::|:.:...::....||:.....||||||.||||:|    .|:...:..||:|
Mouse    60 TSPEDINYASQKQVYRDIGEEMLQHAFEGYNVCIFAYGQTGAGKSYTM----MGKQEKDQQGIIP 120

  Fly   115 RALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLG-------STPHMPMVAARCQRCTCL 172
            :...|:|.|:.....:|. :..|..|::|||.|:..|||.       .....|::....:..:.|
Mouse   121 QLCEDLFSRINDTTNDNM-SYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKL 184

  Fly   173 PLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSKTHH----------SRMNIVDL 227
            .:.|..|:..:::.|.:.|.|..||||..||||||:..|....|.|.          |::::|||
Mouse   185 AVTSYNDIQDLMDSGNKARTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDL 249

  Fly   228 AGSEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHT------------VIPYRDSVLTTV 280
            ||||....||.:|...:||.|||..|.::.||:.::|...:            .|||||||||.:
Mouse   250 AGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWL 314

  Fly   281 LQASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKKLRLNPM-------QVARQ-KQSLAAR 337
            |:.:|...|....:|.:||...:..|||||||:...||::|.|.:       ::.|: |..:...
Mouse   315 LRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRCNAIINEDPNNKLIRELKDEVTRL 379

  Fly   338 TTHVFRQAL--CTST-AIKSNAANHNSIV--VPKSKYSTTKPLSAVLHRTRSELGMTPKAKKRAR 397
            ...::.|.|  .|.| .:.......|::|  .|.|..|.....:|.:......:...|.:::...
Mouse   380 RDLLYAQGLGDITDTNTVPGGPKLTNALVGMSPSSSLSALSSRAASVSSLHERILFAPGSEEAIE 444

  Fly   398 ELLELEETTLELS 410
            .|.|.|:...||:
Mouse   445 RLKETEKIIAELN 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_511125.2 KISc 8..318 CDD:276812 111/354 (31%)
ComEA 606..>645 CDD:441164
Kif1aXP_006529218.1 KISc_KIF1A_KIF1B 4..361 CDD:276816 116/367 (32%)
Kinesin_assoc 358..524 CDD:465047 18/100 (18%)
FHA_KIF1A 500..614 CDD:438778
ERM_helical 633..>686 CDD:466641
KIF1B 814..861 CDD:463574
DUF3694 1250..1406 CDD:463599
PH_KIFIA_KIFIB 1681..1783 CDD:269939
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.