DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and Kif1c

DIOPT Version :10

Sequence 1:NP_511125.2 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_665884.2 Gene:Kif1c / 113886 RGDID:70928 Length:1100 Species:Rattus norvegicus


Alignment Length:638 Identity:166/638 - (26%)
Similarity:260/638 - (40%) Gaps:183/638 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEGAKLSAVRIAVREAPYRQFLGRREPSVVQFPPWSDGKSLIVDQ----------------NEFH 49
            |.||   :|::|||..|:    ..||.|       .|.|.::..|                ..|.
  Rat     1 MAGA---SVKVAVRVRPF----NARETS-------QDAKCVVSMQGNTTSIINPKQSKDAPKSFT 51

  Fly    50 FDHAF--------PATISQDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYS-MGMTPPGEI 105
            ||:::        |...||.::|:.:...::....||:.....||||||.||||: ||...||: 
  Rat    52 FDYSYWSHTSVEDPQFASQQQVYRDIGEEMLLHAFEGYNVCIFAYGQTGAGKSYTMMGRQEPGQ- 115

  Fly   106 LPEHLGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLL-----GS--TPHMPMVA 163
                .||:|:...|:|.||...| :.:.:..|..|::|||.|:..|||     ||  ....|::.
  Rat   116 ----QGIVPQLCEDLFSRVNVNQ-SAQLSYSVEVSYMEIYCERVRDLLNPKSRGSLRVREHPILG 175

  Fly   164 ARCQRCTCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSKTHH--------- 219
            ...|..:.|.:.|.||:..:::.|.:.|.|..||||..||||||:.||....::|.         
  Rat   176 PYVQDLSKLAVTSYADIADLMDCGNKARTVAATNMNETSSRSHAVFTIVFTQRSHDQLTGLDSEK 240

  Fly   220 -SRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMA------AGHTVIPYRDSVL 277
             |::::|||||||....:|..|:..:||.|||..|.::.||:.::|      .....||||||||
  Rat   241 VSKISLVDLAGSERADSSGARGMRLKEGANINKSLTTLGKVISALADLQSKKRKSDFIPYRDSVL 305

  Fly   278 TTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKKLRLNPM-------QVARQKQSLA 335
            |.:|:.:|...|....:|.:||...:..|||||||:....|::|.|.:       ::.|:.|...
  Rat   306 TWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADRTKQIRCNAVINEDPNARLIRELQEEV 370

  Fly   336 ARTTH-VFRQALCTST------------------------AIKSNAANHNSIVVPK--------- 366
            ||... :..|.|..|.                        |..|:...||..:.|.         
  Rat   371 ARLRELLMAQGLSASALGGLKVEEGSPGGVLPAASSPPAPASPSSPPPHNGELEPSFSPSAEPQI 435

  Fly   367 ------SKYSTTKPLSAVLHRT------------------RSELGMTPK---------AKKRARE 398
                  .:...|:.:.|.|:.|                  .:|:|:..:         :.|:...
  Rat   436 GPEEAMERLQETEKIIAELNETWEEKLRKTEALRMEREALLAEMGVAVREDGGTVGVFSPKKTPH 500

  Fly   399 LLELEETTL--ELSSIHIQDSSLSLLGFHSDSD--------KDRHLM----PPPTGQ-------- 441
            |:.|.|..|  |....||:| .::.:| ..|.|        :::|.:    |.|.|:        
  Rat   501 LVNLNEDPLMSECLLYHIKD-GVTRVG-QVDVDIKLTGQFIREQHCLFRSIPQPDGEVMVTLEPC 563

  Fly   442 -------------EPRQASSQNSTLMG---IVEETEPKESSKVQQSMVAPTVP 478
                         ||....|.|..:||   :.....| |.:::::....|..|
  Rat   564 EGAETYVNGKLVTEPLVLKSGNRIVMGKNHVFRFNHP-EQARLERERGVPPPP 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_511125.2 KISc 8..318 CDD:276812 116/357 (32%)
ComEA 606..>645 CDD:441164
Kif1cNP_665884.2 KISc_KIF1A_KIF1B 4..355 CDD:276816 120/370 (32%)
Kinesin_assoc 352..522 CDD:465047 27/170 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..435 5/36 (14%)
FHA_KIF1C 498..599 CDD:438780 21/102 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 900..924
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 949..1100
Blue background indicates that the domain is not in the aligned region.

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