DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and KIF2C

DIOPT Version :9

Sequence 1:NP_001285129.1 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_006836.2 Gene:KIF2C / 11004 HGNCID:6393 Length:725 Species:Homo sapiens


Alignment Length:483 Identity:135/483 - (27%)
Similarity:218/483 - (45%) Gaps:64/483 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IAVREAPY-RQFLGRREPSVVQFPPWSDGKSLI--------------VDQNEFHFDHAFPATISQ 60
            :.||:.|. :|.|.::|..|:..|    .|.|:              ::...|.||.||..|.|.
Human   261 VCVRKRPLNKQELAKKEIDVISIP----SKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASN 321

  Fly    61 DEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFERVT 125
            :.:|:....|||..:.||.:.|..||||||:||:::||....|:......||...|..|:|  :.
Human   322 EVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKAQNASKGIYAMASRDVF--LL 384

  Fly   126 ARQE-NNKDAIQVYASFIEIYNEKPFDLLGSTPHMPMVAARCQRCTCLPL-----HSQADLHHIL 184
            ..|. ..|..::||.:|.||||.|.||||.....:.::....|:...:.|     :|..|:..::
Human   385 KNQPCYRKLGLEVYVTFFEIYNGKLFDLLNKKAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMI 449

  Fly   185 ELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSKTH-HSRMNIVDLAGSE-GVRRTGHEGVARQEGV 247
            ::|:..|....|..|||||||||...|.:::|.. |.:.::|||||:| |...:..:...|.||.
Human   450 DMGSACRTSGQTFANSNSSRSHACFQIILRAKGRMHGKFSLVDLAGNERGADTSSADRQTRMEGA 514

  Fly   248 NINLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQSYLT-FLACISPHQCDLSETLSTL 311
            .||..||::.:.:.::.......|:|:|.||.||:.|...::..| .:|.|||.......||:||
Human   515 EINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCEYTLNTL 579

  Fly   312 RFGTSAKKLRLNPMQVARQKQSLAARTTHVFRQALCTSTAIKSNAANHNSIVVPKSKYSTTKPLS 376
            |:....|:  |:|......:|.:...|..:  :|......|..|        :.|.:...:..:|
Human   580 RYADRVKE--LSPHSGPSGEQLIQMETEEM--EACSNGALIPGN--------LSKEEEELSSQMS 632

  Fly   377 AVLHRTRSELGMTPKAKKRARELLELEETTLELSSIHIQ------------DSSLSLLGFHSDSD 429
            :..........:..||.:..:|:::.....||||.:..|            :|:|:....|..:.
Human   633 SFNEAMTQIRELEEKAMEELKEIIQQGPDWLELSEMTEQPDYDLETFVNKAESALAQQAKHFSAL 697

  Fly   430 KD-----RHLMPPPTGQEPRQASSQNST 452
            :|     |..|     |...|||.|.|:
Human   698 RDVIKALRLAM-----QLEEQASRQISS 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_001285129.1 KISc 8..325 CDD:214526 107/337 (32%)
KISc 8..318 CDD:276812 105/330 (32%)
ComEA 540..648 CDD:224472
KIF2CNP_006836.2 Globular. /evidence=ECO:0000255 2..254
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..116
Microtubule tip localization signal 98..101
Negative regulator of microtubule-binding. /evidence=ECO:0000250 207..238
KISc_KIF2_like 258..586 CDD:276818 105/330 (32%)
Nuclear localization signal. /evidence=ECO:0000255 415..418 0/2 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3330
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.950

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