DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and kif27

DIOPT Version :10

Sequence 1:NP_511125.2 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_031750817.1 Gene:kif27 / 100497455 XenbaseID:XB-GENE-6039606 Length:1393 Species:Xenopus tropicalis


Alignment Length:777 Identity:187/777 - (24%)
Similarity:315/777 - (40%) Gaps:205/777 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VRIAVREAPY--RQFLGRREPSVVQFPPWSDGKSLIVDQNE-FHFDHAFPATISQDEMYQALILP 70
            |::|:|..|.  |:.|...:..|...|   :.:.:||.::. |.||..|..:.|||::|::.|.|
 Frog    18 VKVALRVRPLLSREILHNHQVCVRLVP---NTQQVIVGKDRVFTFDFVFGKSSSQDDVYRSSIKP 79

  Fly    71 LVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFERVTARQENNKDAI 135
            |:..|:||:..|..||||||:||:|::|......:..|..||:|||:.::|:.: |.:.|.:.::
 Frog    80 LLGSLMEGYNATVFAYGQTGSGKTYTIGGGNVASVADEEKGIIPRAIQELFQCI-AERHNVEFSV 143

  Fly   136 QVYASFIEIYNEKPFDLLGSTPHMP-------------MVAAR-CQRCTCLPLHSQADLHHILEL 186
            :|  |:||:|.|:..|||....:|.             :|.|: ||      :.:..::..:|..
 Frog   144 RV--SYIEVYKEELLDLLELETNMKDLHIREDEKGNTVIVGAKECQ------VENADEVMSLLAA 200

  Fly   187 GTRNRRVRPTNMNSNSSRSHAIVTIHV--KSKTH------------HSRMNIVDLAGSEGVRRTG 237
            |:..|....|.||..|||||||.||.:  :|..|            .|:.:.|||||||.|.:||
 Frog   201 GSAARHTGSTQMNERSSRSHAIFTITICQQSSQHGDDAGTNSIQTITSKFHFVDLAGSERVTKTG 265

  Fly   238 HEGVARQEGVNINLGLLSINKVVMSMA-----AGHTVIPYRDSVLTTVLQASLTAQSYLTFLACI 297
            :.|...:|.:.||.|||::..|:.::.     :.|  |||||:.:|.:|:.||...:....:.||
 Frog   266 NTGERFKESIQINSGLLALGNVISALGDPKRKSAH--IPYRDAKITRILKDSLGGNAKTVMITCI 328

  Fly   298 SPHQCDLSETLSTLRFGTSAKKLRLNP-----------------MQVAR-----QKQSLAARTTH 340
            ||...||.|:|::|::...|:.::..|                 ::|.|     |:.|..:||:.
 Frog   329 SPSSSDLDESLNSLKYANRARNIKNKPVVNYNPDWDRMDEMELEIKVLREALQNQQSSRVSRTSQ 393

  Fly   341 V-------------------------FRQALCTSTAIKSNAANHNSIVVPKSKYSTTKPLSAVLH 380
            |                         |.|..||..|........:...:|:|:.:..:....:..
 Frog   394 VSQDWSQGKDKIRSLEEKVAQLQLECFNQRHCTEEAFSLFLDLKDISGLPQSEKNRVQDWLHLAE 458

  Fly   381 RTRSELGMTPKAKKR-----------------------------ARELLELEETTLELSSIH--- 413
            ..||.:....:...|                             ||:.|||:....::.|:.   
 Frog   459 GLRSPVAADAEGSSREEPHHVTILQLKRELKKCQDALATDEEVFARKKLELKGLQEQIQSLQQET 523

  Fly   414 ------IQDSSLSLLGFHSDSDKDRHLMPPPTGQEP---RQASSQNSTLMGIVEETEPKESSKVQ 469
                  :|::..:.........:.:.|:.....::|   ||.|.:|..     ||..|:|.|:..
 Frog   524 EEYQKCLQEAEYTKTLQTEKLVEQQLLIDELKSKKPEIYRQFSQENED-----EEELPREISQRP 583

  Fly   470 QSMVAPTVPTTVRCQLFNTT-------ISPISLRAS----SSQRELSGIQPMEETVV-------- 515
            .     |||.:...|..:::       ..|..:|.|    |.:|.::|.:...:.::        
 Frog   584 H-----TVPPSTHTQKLSSSSLQAAGQAEPRKVRTSPPSYSLERMVAGFRTRSQMLLELIEEQDE 643

  Fly   516 -----------ASPQQP--------CLRRSVRLASSMRSQNYGAIPKVMNLRRST--------RL 553
                       ..|.:|        ..|||:....:.|..:.||.....|..|..        .|
 Frog   644 VLHEKFSDQSEEEPDEPEKENRKKSPFRRSINRTWTRRQGSAGAETLNSNSDRENDANSNACPAL 708

  Fly   554 AGIREHATSVVVKNETDAIPHLRSTVQKKR--TRNVKPAPKAWMANNTKCFLDLLNNGNVKQ 613
            ..:||.....|.|.:|..: .|....||.|  |.|:|        ...:...:|:..||..|
 Frog   709 ESLRESQVLNVEKLKTSDV-RLADAKQKMRELTINIK--------MKEELIKELIKTGNDAQ 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_511125.2 KISc 8..318 CDD:276812 113/344 (33%)
ComEA 606..>645 CDD:441164 3/8 (38%)
kif27XP_031750817.1 KISc_KIF4 16..352 CDD:276823 114/347 (33%)
SMC_prok_B <363..>586 CDD:274008 35/232 (15%)
SMC_prok_B <481..900 CDD:274008 55/300 (18%)
Smc <707..>1237 CDD:440809 17/64 (27%)

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