DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and kifc2

DIOPT Version :10

Sequence 1:NP_511125.2 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_002941548.2 Gene:kifc2 / 100485082 XenbaseID:XB-GENE-995645 Length:924 Species:Xenopus tropicalis


Alignment Length:355 Identity:107/355 - (30%)
Similarity:168/355 - (47%) Gaps:67/355 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VRIAVREAPYRQFLGRREPSVVQFPPWSDGKSLIVDQNE--------------FHFDHAFPATIS 59
            :|:..|..|:..  ...|...:..|       :.:|.|:              |..|..|.....
 Frog   586 IRVLCRVRPHSH--NNEEEGSLTSP-------ITIDMNDDTRLSVFYKGKEKNFELDKVFVPQAK 641

  Fly    60 QDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFERV 124
            |:|::|. |.|:|...:.|:.....||||||:||:|:|      |...|:.||..||:..:::.:
 Frog   642 QEEVFQE-IEPMVMSCINGYNVCIFAYGQTGSGKTYTM------EGTLENPGINQRAMQALYKEM 699

  Fly   125 TARQENNKDAIQVYA---SFIEIYNEKPFDLLGSTP----------------HMPMVAARCQRCT 170
            .||:     .:..|.   |.:|||||...|||...|                |:|.:       |
 Frog   700 EARK-----GLWHYTVSLSMVEIYNEVIRDLLSKDPQEKLDIKLNPDGSGQLHVPGL-------T 752

  Fly   171 CLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSK------THHSRMNIVDLAG 229
            ...::|...:..:|.||.:||....||||..||||||::||::..|      ....::|:|||||
 Frog   753 STEVNSFRHIKKLLTLGKKNRATFCTNMNERSSRSHALLTINISGKDLTTGTVTTGKLNLVDLAG 817

  Fly   230 SEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQSYLTFL 294
            ||.|.::|.||...:|..|||..||::.:|:.::.|....||:|:|.||.:||.||...:....:
 Frog   818 SERVCKSGAEGERLKEAQNINKSLLALGEVIQALRAKQGHIPFRNSKLTYLLQDSLGKGNKTVMM 882

  Fly   295 ACISPHQCDLSETLSTLRFGTSAKKLRLNP 324
            ..:||.:.::.||:.:|:|.....|:.|.|
 Frog   883 VQVSPSEGNVGETVCSLKFAQRVCKVELGP 912

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_511125.2 KISc 8..318 CDD:276812 104/347 (30%)
ComEA 606..>645 CDD:441164
kifc2XP_002941548.2 SMC_prok_B 230..>535 CDD:274008
KISc_C_terminal 583..910 CDD:276817 105/351 (30%)
Blue background indicates that the domain is not in the aligned region.

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