DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and kif3b

DIOPT Version :10

Sequence 1:NP_511125.2 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001093615.1 Gene:kif3b / 100101641 ZFINID:ZDB-GENE-050119-3 Length:775 Species:Danio rerio


Alignment Length:663 Identity:171/663 - (25%)
Similarity:283/663 - (42%) Gaps:103/663 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 FHFDHAFPATISQDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSM-GMTPPGEILPEHLG 111
            |.||..:.....|.|:|.....||||.:|.||..|..|||||||||:|:| |:...    ||..|
Zfish    58 FTFDSVYDWNSKQMELYDETFRPLVDSVLFGFNGTIFAYGQTGTGKTYTMEGVRND----PERRG 118

  Fly   112 ILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLG-------STPHMPMVAARCQRC 169
            ::|.:...||..::..|  |:..: |.||::|||.|:..|||.       .....|......:..
Zfish   119 VIPNSFEHIFTHISCSQ--NQQYL-VRASYLEIYQEEIRDLLSKDQARRLELKERPDTGVYVKDL 180

  Fly   170 TCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSK------THHSR---MNIV 225
            :.....|..::.|::.:|.:||.|..||||.:|||||||..|.::..      .:|.|   :|:|
Zfish   181 SSFVTKSVREIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSELGPDGENHIRVGKLNLV 245

  Fly   226 DLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGH-TVIPYRDSVLTTVLQASLTAQS 289
            ||||||...:||.:|...:|...|||.|.::..|:.::..|. |.||||||.||.:||.||...:
Zfish   246 DLAGSERQTKTGAQGERLKEATKINLSLSALGNVISALVDGRSTHIPYRDSKLTRLLQDSLGGNA 310

  Fly   290 YLTFLACISPHQCDLSETLSTLRFGTSAKKLRLNPM---------------QVARQKQSLAARTT 339
            ....:|.|.|...::.|||:|||:...||.::..|.               ::||.|:.|..|:.
Zfish   311 RTVMVANIGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKDALLREFQEEIARLKEQLEKRSG 375

  Fly   340 HVFRQALCTSTAI--------KSNAANHNSIVVPKSKYSTTKPLSAVLHRTRSELGMTPKA---- 392
            ...|:........        :....:.:.....:......|.::...|..:.:|....:|    
Zfish   376 RKRRRRRRRRVGEGGEEFEDGEDEEDDDDDDEDEEEGVDADKNIADYWHEQQEKLEKERRAIMED 440

  Fly   393 ------------KKRARELLEL----EETTLELSSIHIQDSSL-----SLLGFHSDSDKDRHLMP 436
                        |::.|::.:|    |.:.:..:.:...:|.|     :::...::..|...|..
Zfish   441 HSLVAEEKQRLLKEKERKMTDLHKEKEASEMLTAKVKAMESKLLVGGKNIVDHTNEQQKVLELKR 505

  Fly   437 PPTGQEPRQASSQNSTLMGIVEET-EPKES-SKVQQSMVAPTVPTTVRCQLFNTTISPISLRASS 499
            ....::.|:.......:....||| |.||: |.:||.:   .:.|....:||:...|..|....:
Zfish   506 QEIAEQKRREREMKQEMECRDEETLELKETYSSLQQEV---DIKTKKLKKLFSKLQSVKSEIQDA 567

  Fly   500 SQRELSGIQPMEETVVASPQQPCLRRSVRLASSMRSQNYGAIP-----KVM---------NLRRS 550
            ....:...|.:|:|      |..|.|.::| ..:..:|:  ||     |::         :|.:.
Zfish   568 QDEHVKYRQELEQT------QNELTRELKL-KHLIIENF--IPMEEKNKIVTRATFDEEDDLWKM 623

  Fly   551 TRLAGIREHATSVVVKNETDAIPHLRSTVQKKRTRNVKPAPKAWMANNTKCFLDLLNNGNVKQLQ 615
            |.:..| :::...::|....|:.:.|...|..|...:......:.|.|. ..|:|.......:..
Zfish   624 TPITRI-QNSDHQMMKRPVSAVGYRRPLSQHARMAMLMRPDVRYKAENI-LLLELDLPSRTTKDY 686

  Fly   616 EIPGIGPKSAFSL 628
            |.|.|.||.|.:|
Zfish   687 EGPVIAPKVAAAL 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_511125.2 KISc 8..318 CDD:276812 105/287 (37%)
ComEA 606..>645 CDD:441164 7/23 (30%)
kif3bNP_001093615.1 KISc_KIF3 15..341 CDD:276822 107/289 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..419 3/46 (7%)
Mplasa_alph_rch <425..>611 CDD:275316 36/197 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 716..775
Blue background indicates that the domain is not in the aligned region.

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