DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11695 and SNAI1

DIOPT Version :9

Sequence 1:NP_572732.1 Gene:CG11695 / 32106 FlyBaseID:FBgn0030316 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_005976.2 Gene:SNAI1 / 6615 HGNCID:11128 Length:264 Species:Homo sapiens


Alignment Length:255 Identity:65/255 - (25%)
Similarity:94/255 - (36%) Gaps:72/255 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 AVTAPKTQAVK-AKARTKTHKAEAD----EDEDAEGEGD---------PESRSS---NSREMDSY 202
            :|.||:.|.:. |..|.:.....|:    .|||: |:|.         |.|.||   :|.|.::|
Human    63 SVLAPQAQPIAWASLRLQESPRVAELTSLSDEDS-GKGSQPPSPPSPAPSSFSSTSVSSLEAEAY 126

  Fly   203 IALHGRLECCICGGDEQFPNFAEMKRHFRNHHQSLGYVVCCQRRYKKRALYVDHLHMHNDPNYFR 267
            .|               ||...::.:..    ..|......|.|                 ..|.
Human   127 AA---------------FPGLGQVPKQL----AQLSEAKDLQAR-----------------KAFN 155

  Fly   268 CKICSKQLVSRISYDVHMLRFHPNKDDLSFACDQCSKRFSKQFLLTIHSRVHQQERNEQCKHCDR 332
            ||.|:|:.:|     :..|:.|.....|...|..|.|.||:.:||..|.|.|..|:...|.||.|
Human   156 CKYCNKEYLS-----LGALKMHIRSHTLPCVCGTCGKAFSRPWLLQGHVRTHTGEKPFSCPHCSR 215

  Fly   333 SFRTAVDLRLHMRRTHDPAFVPFICDSCGAKFKTKQNLLVHKRTVHREGSQLPEVQCQEC 392
            :|....:||.|: :||... ..:.|.:|...|....  |:||   |:|..      |..|
Human   216 AFADRSNLRAHL-QTHSDV-KKYQCQACARTFSRMS--LLHK---HQESG------CSGC 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11695NP_572732.1 zf-AD 2..81 CDD:285071
C2H2 Zn finger 268..289 CDD:275368 6/20 (30%)
C2H2 Zn finger 299..319 CDD:275368 9/19 (47%)
C2H2 Zn finger 327..348 CDD:275368 8/20 (40%)
C2H2 Zn finger 357..376 CDD:275368 6/18 (33%)
C2H2 Zn finger 389..409 CDD:275368 2/4 (50%)
C2H2 Zn finger 420..440 CDD:275368
C2H2 Zn finger 448..468 CDD:275368
C2H2 Zn finger 476..494 CDD:275368
SNAI1NP_005976.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
SNAG domain. /evidence=ECO:0000305|PubMed:20389281, ECO:0000305|PubMed:21300290 1..20
Required and sufficient for interaction with KDM1A. /evidence=ECO:0000269|PubMed:20389281, ECO:0000269|PubMed:23721412 2..7
LATS2 binding 10..40
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 86..115 8/29 (28%)
Destruction motif 95..100 2/5 (40%)
Required for FBXL14-triggered degradation 120..151 8/49 (16%)
Required for nuclear localization and interaction with KPNB1, NOTCH1 and PARP1. /evidence=ECO:0000269|PubMed:21577210, ECO:0000269|PubMed:22128911 151..264 41/147 (28%)
C2H2 Zn finger 156..176 CDD:275368 7/24 (29%)
C2H2 Zn finger 182..202 CDD:275368 9/19 (47%)
zf-H2C2_2 195..218 CDD:404364 9/22 (41%)
zf-C2H2 208..230 CDD:395048 8/22 (36%)
C2H2 Zn finger 210..230 CDD:275368 8/20 (40%)
C2H2 Zn finger 238..255 CDD:275368 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.