DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11695 and scrt1a

DIOPT Version :10

Sequence 1:NP_572732.1 Gene:CG11695 / 32106 FlyBaseID:FBgn0030316 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001107073.1 Gene:scrt1a / 564658 ZFINID:ZDB-GENE-080219-30 Length:279 Species:Danio rerio


Alignment Length:338 Identity:76/338 - (22%)
Similarity:123/338 - (36%) Gaps:89/338 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 MKKQLGLQQLKMEPFSEDE--------DADTKAQILCEPEID--VSPAAADNEECNEIDGDASSN 126
            |.:...::::|::.||..:        .||...:...:..|.  ::||..|.|.           
Zfish     1 MPRSFLVKKVKLDDFSSSDLESSYGRSRADISLRFHEKAYISDYMTPAPYDGES----------- 54

  Fly   127 SRSSSIRTTSLREMRLPSPIRRRMRLPRAVTAPKTQAVKAKARTKTHKAEADEDEDAEGEGDPES 191
              .|.|:..|      |.||...:.....  ||.:.           :.::.:.|.:.|..:.::
Zfish    55 --DSGIKVPS------PGPIYDSIHSDYG--APDSD-----------QPDSPQSEISSGYINGDT 98

  Fly   192 RSSNSREMDSYIALHGRLE--------------CCICGGDEQFPNFAEMKRHFRNHHQSLGYVVC 242
            ..|....:|::....||..              |..||  :.:...:.:.|| :..|:||.    
Zfish    99 AVSEGYTVDAFFITDGRSRRKAISSPRTLQRHTCNECG--KTYATSSNLSRH-KQTHRSLD---- 156

  Fly   243 CQRRYKKRALYVDHLHMHNDPNYFRCKICSKQLVSRISYDVHMLRFHPNKDDLSFACDQCSKRFS 307
             .:..||                  |..|.|..||..:..:|:|     ..||...||.|.|.||
Zfish   157 -SKMAKK------------------CPTCGKVYVSMPAMAMHLL-----THDLKHKCDICGKAFS 197

  Fly   308 KQFLLTIHSRVHQQERNEQCKHCDRSFRTAVDLRLHMRRTHDPAFVPFICDSCGAKFKTKQNLLV 372
            :.:||..|.|.|..|:...|.||.::|....:||.|| :||. ||..:.|..|...|..|..|..
Zfish   198 RPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHM-QTHS-AFKHYKCKRCNKTFALKSYLNK 260

  Fly   373 HKRTVHREGSQLP 385
            |..:...:|:..|
Zfish   261 HYESACFKGAFAP 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11695NP_572732.1 zf-AD 2..81 CDD:462262 1/8 (13%)
C2H2 Zn finger 268..289 CDD:275368 7/20 (35%)
C2H2 Zn finger 299..319 CDD:275368 10/19 (53%)
SUF4-like 327..>387 CDD:411020 20/59 (34%)
C2H2 Zn finger 327..348 CDD:411020 8/20 (40%)
C2H2 Zn finger 327..348 CDD:275368 8/20 (40%)
C2H2 Zn finger 357..378 CDD:411020 6/20 (30%)
C2H2 Zn finger 357..376 CDD:275368 6/18 (33%)
C2H2 Zn finger 389..409 CDD:275368
C2H2 Zn finger 420..440 CDD:275368
C2H2 Zn finger 448..468 CDD:275368
C2H2 Zn finger 476..494 CDD:275368
scrt1aNP_001107073.1 zf-C2H2 130..152 CDD:395048 5/24 (21%)
C2H2 Zn finger 132..152 CDD:275368 5/22 (23%)
C2H2 Zn finger 163..180 CDD:275371 5/16 (31%)
zf-C2H2 187..209 CDD:395048 10/21 (48%)
C2H2 Zn finger 189..209 CDD:275368 10/19 (53%)
zf-H2C2_2 202..225 CDD:463886 8/22 (36%)
C2H2 Zn finger 217..237 CDD:275368 8/20 (40%)
zf-C2H2 217..237 CDD:395048 8/20 (40%)
C2H2 Zn finger 245..261 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.

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