DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11695 and scrt1b

DIOPT Version :10

Sequence 1:NP_572732.1 Gene:CG11695 / 32106 FlyBaseID:FBgn0030316 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001014369.1 Gene:scrt1b / 541533 ZFINID:ZDB-GENE-050327-72 Length:279 Species:Danio rerio


Alignment Length:327 Identity:76/327 - (23%)
Similarity:118/327 - (36%) Gaps:67/327 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 MKKQLGLQQLKMEPFSEDE--------DADTKAQILCEPEID--VSPAAADNEECNEIDGDASSN 126
            |.:...::::|::.||..|        ..|...:|..:..|.  ::||..|.|.    ||.....
Zfish     1 MPRSFLVKKVKLDDFSSSELESAYGRSRTDLSFRIHDKGYISDYITPAIYDGES----DGGTKVP 61

  Fly   127 SRSSSIRTTSLREMRLPSPIRRRMRLPRAVTAPKTQAVKAKARTKTHKAEADEDEDAEGEGDPES 191
            |               |.||.........  ||.:.           :.::.:.|...|..:.::
Zfish    62 S---------------PGPIYDSNHSDYG--APDSD-----------QPDSPQSEITSGYINGDN 98

  Fly   192 RSSNSREMDSYIALHGRLECCICGGDEQFPNFAEMKRHFRNHHQSLGYVVCCQRRYKKRALYVDH 256
            ..|....:|::....||....:..|..      .::||..|.         |.:.|...:....|
Zfish    99 AVSEGYTVDAFFITDGRSRRKVISGSR------TLQRHTCNE---------CGKTYATSSNLSRH 148

  Fly   257 LHMH---NDPNYFRCKICSKQLVSRISYDVHMLRFHPNKDDLSFACDQCSKRFSKQFLLTIHSRV 318
            ...|   :.....:|..|.|..||..:..:|:|     ..||...||.|.|.||:.:||..|.|.
Zfish   149 KQTHRSLDSKMAKKCPTCGKVYVSMPAMAMHLL-----THDLKHKCDICGKAFSRPWLLQGHMRS 208

  Fly   319 HQQERNEQCKHCDRSFRTAVDLRLHMRRTHDPAFVPFICDSCGAKFKTKQNLLVHKRTVHREGSQ 383
            |..|:...|.||.::|....:||.|| :||. ||..|.|..|...|..|..|..|..:...:|:.
Zfish   209 HTGEKPFGCAHCGKAFADRSNLRAHM-QTHS-AFKHFKCKRCNKTFVLKSYLNKHYESACFKGAF 271

  Fly   384 LP 385
            .|
Zfish   272 SP 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11695NP_572732.1 zf-AD 2..81 CDD:462262 1/8 (13%)
C2H2 Zn finger 268..289 CDD:275368 7/20 (35%)
C2H2 Zn finger 299..319 CDD:275368 10/19 (53%)
SUF4-like 327..>387 CDD:411020 21/59 (36%)
C2H2 Zn finger 327..348 CDD:411020 8/20 (40%)
C2H2 Zn finger 327..348 CDD:275368 8/20 (40%)
C2H2 Zn finger 357..378 CDD:411020 6/20 (30%)
C2H2 Zn finger 357..376 CDD:275368 6/18 (33%)
C2H2 Zn finger 389..409 CDD:275368
C2H2 Zn finger 420..440 CDD:275368
C2H2 Zn finger 448..468 CDD:275368
C2H2 Zn finger 476..494 CDD:275368
scrt1bNP_001014369.1 zf-C2H2 130..152 CDD:395048 5/30 (17%)
C2H2 Zn finger 132..152 CDD:275368 4/28 (14%)
C2H2 Zn finger 163..180 CDD:275371 5/16 (31%)
zf-C2H2 187..209 CDD:395048 10/21 (48%)
C2H2 Zn finger 189..209 CDD:275368 10/19 (53%)
zf-H2C2_2 202..225 CDD:463886 8/22 (36%)
C2H2 Zn finger 217..237 CDD:275368 8/20 (40%)
zf-C2H2 217..237 CDD:395048 8/20 (40%)
C2H2 Zn finger 245..261 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.

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