DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11695 and pita

DIOPT Version :10

Sequence 1:NP_572732.1 Gene:CG11695 / 32106 FlyBaseID:FBgn0030316 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_611806.3 Gene:pita / 37730 FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster


Alignment Length:656 Identity:131/656 - (19%)
Similarity:220/656 - (33%) Gaps:187/656 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ICRLCLDDAEHSVPIFDQDDSGDQPVPSNLAELIEKHLQLVLLPNDGVSKSLCTQC---WQQLAD 63
            :||.||.: :....||:::..  ....:||...|.....:.:...||:...:|.:|   ::....
  Fly    17 VCRFCLTE-QKLASIFEENPR--VKTTANLPLQIMAITAIEVYAGDGMPGHICLECRLLFEHCYR 78

  Fly    64 FEQFC---------------------------AMVMKKQLGLQQLKMEPFSE------DEDADTK 95
            |:|.|                           .||..|:|.:...|....||      :..|.:.
  Fly    79 FKQMCKRAETLLRQYPLTGNWPSPLEKPRAPMTMVASKKLLVVPAKTAEPSETPKKLLNTMAKSS 143

  Fly    96 AQILCEPEIDVSPAAA------------------------DNEECNEIDGDASSNSRSSSIRTTS 136
            :|::.| ::.|..:|.                        :|:|.:..|..:.....:|.:    
  Fly   144 SQVIIE-DVQVLESAMVTPRTVAGSSPVPRRSHAYELKVDNNQELSMDDVQSMLEDMASEL---- 203

  Fly   137 LREMRLP------SPIRRRM----------RLPRAVTAPKTQAVKAKARTKTHKA----EADEDE 181
              |...|      ||::.::          :.|.|...|:....|.|.....:.|    ..|.|.
  Fly   204 --EKEFPDIPQKASPVKPKVLNKSSIRILNKGPAAPVEPRLATPKVKRDDSGNVAIVTEVLDSDL 266

  Fly   182 DAEGEGDPESRSSNSREMDSYIALHGRLECCICGGDEQFPNFAEMKRHFRNHHQSLGYVVC--CQ 244
            ..:.:.||   :.|:.::                ..:.||                    |  |:
  Fly   267 PLDDQDDP---TKNAEKV----------------ATDVFP--------------------CPDCE 292

  Fly   245 RRYKKRALYVDHLHMHNDPNYFRCKICSKQLVSRISYDVHMLRFHPNKDDLSFACDQCSKRFSKQ 309
            |.:..:.|...|...|.....|:|.:|.|...|:  ||:....| .:..:..|.|..|||.|:::
  Fly   293 RSFPLQQLLEIHRLNHTRSRSFQCLLCEKSFFSK--YDLAKHNF-VHTGERPFKCAICSKAFTRK 354

  Fly   310 FLLTIHSRVHQQERNEQCKHCDRSFRTAVDLRLHMRRTHDPAFVPFICDSCGAKFKTKQNLLVHK 374
            .||..|.|.|.......|.:|::.|.:..::..|..|.....  ||.|..|...|..||.|..|:
  Fly   355 ALLHRHERTHTDVPKFICVYCEKPFLSRQEMEKHAERHQKKR--PFQCGVCTKSFAFKQGLERHE 417

  Fly   375 RTVHREGSQLPEVQCQECQVWLSDENSLRKHMYMHLDAASLRQWKCEQCGLEKGSRAKLAAHIRY 439
             |||......|   ||.|:...|..:.|.:|:..|   |..|.:.|:.|.........|:.|:|.
  Fly   418 -TVHSTNLPFP---CQHCERSFSTASKLARHLVAH---AGKRAYPCKYCHKSYMLSHHLSRHLRT 475

  Fly   440 H-----------------------------HPKEYHKCTHCAKEFKSSRSLEEHTATHTGQDLYE 475
            |                             |.....||..|.|:.:...|:|.|...|...:.:.
  Fly   476 HTQTSDASFVCSECKVSYSNYNDLLDHALIHATASLKCPMCRKQIEDIDSVESHMDQHKQSERHA 540

  Fly   476 CAFCERTFKNSGNMHKHRRQMHAAQVAALQQQKKVPPSKRKDKGDLLLDVLAAGGKD--MSHVMG 538
            |.||:..|.....:.:|....|..::...|       ::.:|.|:      ..||.|  ..|:..
  Fly   541 CEFCDHIFLTQKCLQRHIEDDHVVEMEPYQ-------NEFEDDGE------GEGGVDEKEEHLDD 592

  Fly   539 AGDMND 544
            ..||::
  Fly   593 FEDMDN 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11695NP_572732.1 zf-AD 2..81 CDD:462262 20/108 (19%)
C2H2 Zn finger 268..289 CDD:275368 6/20 (30%)
C2H2 Zn finger 299..319 CDD:275368 9/19 (47%)
SUF4-like 327..>387 CDD:411020 18/59 (31%)
C2H2 Zn finger 327..348 CDD:411020 5/20 (25%)
C2H2 Zn finger 327..348 CDD:275368 5/20 (25%)
C2H2 Zn finger 357..378 CDD:411020 8/20 (40%)
C2H2 Zn finger 357..376 CDD:275368 7/18 (39%)
C2H2 Zn finger 389..409 CDD:275368 6/19 (32%)
C2H2 Zn finger 420..440 CDD:275368 5/19 (26%)
C2H2 Zn finger 448..468 CDD:275368 6/19 (32%)
C2H2 Zn finger 476..494 CDD:275368 5/17 (29%)
pitaNP_611806.3 zf-AD 17..92 CDD:214871 16/77 (21%)
COG5048 <281..506 CDD:227381 60/272 (22%)
C2H2 Zn finger 288..308 CDD:275368 5/19 (26%)
C2H2 Zn finger 316..336 CDD:275368 7/22 (32%)
C2H2 Zn finger 344..364 CDD:275368 9/19 (47%)
C2H2 Zn finger 372..388 CDD:275370 3/15 (20%)
C2H2 Zn finger 400..420 CDD:275368 8/20 (40%)
C2H2 Zn finger 428..448 CDD:275368 6/19 (32%)
C2H2 Zn finger 456..476 CDD:275368 5/19 (26%)
C2H2 Zn finger 486..506 CDD:275368 0/19 (0%)

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