DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11696 and AT3G29340

DIOPT Version :9

Sequence 1:NP_572731.1 Gene:CG11696 / 32104 FlyBaseID:FBgn0030314 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_189580.1 Gene:AT3G29340 / 822592 AraportID:AT3G29340 Length:650 Species:Arabidopsis thaliana


Alignment Length:456 Identity:82/456 - (17%)
Similarity:145/456 - (31%) Gaps:131/456 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 QQTHQIIKRKYEKRKQQNKAKITELSLRESRARQ------------------------------- 216
            |:.|:.||.|..|:      :.:|:..|:|:.::                               
plant    62 QRIHRPIKEKLSKQ------EFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLH 120

  Fly   217 RELKRSSAGAEDDQDGDEDEEDEEDVGGELTPDADEQPKPRGKRGRPKTKKLVTADDNDDTSEVP 281
            |..||..|..:|:....:..|.::.|.           :|...:...:.|.|...:...|.|| |
plant   121 RSTKRELASTQDENSLLDSSEAKKIVS-----------QPSSFKVSQEEKFLHCVELKQDFSE-P 173

  Fly   282 VK---------RSSIKEMDDYIAANVKLDCAICAAPLEDFNDLKRHFRVEHDCTGYVKCCNNRYK 337
            :.         ||.::....:.::   ..|.||.........|..|.||..:.:|.:.|.....:
plant   174 LSHSGALPSTLRSKLQTKTQWKSS---CHCKICGKSFVCSQGLGNHKRVHREISGKLACKRKYTE 235

  Fly   338 KRTLYVDHLHCH---KDPQYFSCQSCRKNFLNRNSQVMHMLRFHSQQQELVHQCAICEARFAKKF 399
            ....:.|.|...   |.|..|.        :::..:::|.:.......||     :..:.|.|..
plant   236 DYNPFSDSLKAKKIVKKPSSFE--------VSQEEKILHCVELKQDFGEL-----LAHSGFDKSI 287

  Fly   400 LLTMHLKGHKGTERPEV---------------------CDTCSKTFRTKFELSAHVKRMHAADFT 443
            ..:..:|..|...:.|.                     |.||.:.|.|...:..| :|||:.:..
plant   288 SCSKSIKVKKVARKNEKTEDSTSLFGVFVGEMSQRLHGCKTCGRKFGTLKGVYGH-QRMHSGNHN 351

  Fly   444 PI-----------------ICDICGTHFRSKANFLIHKKALHPDGPVAEVQCTLCGRWLRDERSL 491
            .|                 :|.: ....|.|.:..:.:...|.....|.....|| :.:.|..|:
plant   352 RIEDENGLERIWGLKKKSRVCSV-SAFDRFKGSSFMAEIEKHEVIEAALNLVMLC-QGVYDFASI 414

  Fly   492 RKHLARHDDRDGDTKYRCLLCNAEKSSRAALSSHMRYHHSAKRHKCSLCDKEFKLPRALAEHMAT 556
            ..........|.:.|...|....:|.||::             :|||:|:|.|...:||..|...
plant   415 SNLPLGDGFMDLELKPCPLRRKLQKKSRSS-------------YKCSICEKSFVCSQALGSHQRL 466

  Fly   557 H 557
            |
plant   467 H 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11696NP_572731.1 zf-AD 2..78 CDD:285071
C2H2 Zn finger 332..349 CDD:275368 2/16 (13%)
C2H2 Zn finger 357..378 CDD:275368 1/20 (5%)
C2H2 Zn finger 388..408 CDD:275368 3/19 (16%)
C2H2 Zn finger 417..438 CDD:275368 7/20 (35%)
C2H2 Zn finger 447..465 CDD:275368 3/17 (18%)
C2H2 Zn finger 478..498 CDD:275368 4/19 (21%)
C2H2 Zn finger 509..529 CDD:275368 4/19 (21%)
C2H2 Zn finger 537..557 CDD:275368 8/19 (42%)
C2H2 Zn finger 565..583 CDD:275368
AT3G29340NP_189580.1 zf-C2H2_6 43..68 CDD:290623 2/5 (40%)
C2H2 Zn finger 45..65 CDD:275368 1/2 (50%)
C2H2 Zn finger 100..120 CDD:275368 0/19 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.