DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11696 and Zfp410

DIOPT Version :9

Sequence 1:NP_572731.1 Gene:CG11696 / 32104 FlyBaseID:FBgn0030314 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_659082.1 Gene:Zfp410 / 52708 MGIID:1289280 Length:478 Species:Mus musculus


Alignment Length:482 Identity:102/482 - (21%)
Similarity:158/482 - (32%) Gaps:156/482 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 LKTELPELPELTEPEPALV--VWNTESPIEPKLSYEGDDIKDHILCEPVIDALSAGDEKDSDYGD 146
            |..||...|||      ||  |.||..|:...|  ...:.|| |.|..::....|     |:...
Mouse     2 LSDELESKPEL------LVQFVQNTSIPLGQGL--VESEAKD-ITCLSLLPVTEA-----SECSR 52

  Fly   147 TFEPDFEPESQPDEEEEPEPDPVKPRPRGRPRKTALQQTHQI-IKRKYEKRKQQNKAKITE-LSL 209
            ...||..|......:|.|              .:|:.::.|: :....|:.:.|...|..| |:.
Mouse    53 LMLPDETPNHANSSKEVP--------------SSAVLRSLQVNVGPDGEETRAQTVQKSPEFLTT 103

  Fly   210 RESRARQRELKRSS-----------AGAEDDQDGDEDEEDE-EDVGGE-LTPDADEQPKPRGKR- 260
            .||.:..::|:.|.           ||.....:.....:|| ||.|.: |:.::.:...|...| 
Mouse   104 PESPSLLQDLQPSDSTSFILLNLTRAGLGSSAEHFVFVQDETEDSGADFLSAESTDSSIPWFLRV 168

  Fly   261 -----------GRPKTKKLVTADDNDDTSEVPVKRSSIKEMDDYIAANVKLDCAICAAPLEDFND 314
                       .|.:..|......|.:...:.......|:......|..||.|.           
Mouse   169 QELAHDSLIAATRAQLAKNAKTGSNGENVHLGSGDGQPKDSGPLPQAEKKLKCT----------- 222

  Fly   315 LKRHFRVEHDCTGYVKCCNNRYKKRTLYVDHLHCHKDPQYFSC--QSCRKNF--LNRNSQVMHML 375
                          |:.|:..:.....:..||..|::.:.|.|  :.|.|:|  |.|        
Mouse   223 --------------VEGCDRTFVWPAHFKYHLKTHRNERSFICPAEGCGKSFYVLQR-------- 265

  Fly   376 RFHSQQQELVHQCAICEARFAKKFLLTMHLKGHKGTERPEVC--DTCSKTFRTKFELSAHVKRMH 438
                                     |.:|::.|.| |:|.:|  ..|.|.|.|...|..| :|:|
Mouse   266 -------------------------LKVHMRTHNG-EKPFMCHESGCGKQFTTAGNLKNH-RRIH 303

  Fly   439 AADFTPIICDICGTHFRSKANFLIHKKALHPDGPVAEVQCTLCGRWLRDERSLRKHLARHDDRDG 503
            ..: .|.:|:..|                             |||...:..||||||..|   .|
Mouse   304 TGE-KPFLCEAQG-----------------------------CGRSFAEYSSLRKHLVVH---SG 335

  Fly   504 DTKYRCLLCNAEKSSRAALSSHMRYHH 530
            :..::|.:|....|...:.:.|||.||
Mouse   336 EKPHQCQVCGKTFSQSGSRNVHMRKHH 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11696NP_572731.1 zf-AD 2..78 CDD:285071
C2H2 Zn finger 332..349 CDD:275368 3/16 (19%)
C2H2 Zn finger 357..378 CDD:275368 6/24 (25%)
C2H2 Zn finger 388..408 CDD:275368 2/19 (11%)
C2H2 Zn finger 417..438 CDD:275368 8/22 (36%)
C2H2 Zn finger 447..465 CDD:275368 2/17 (12%)
C2H2 Zn finger 478..498 CDD:275368 9/19 (47%)
C2H2 Zn finger 509..529 CDD:275368 6/19 (32%)
C2H2 Zn finger 537..557 CDD:275368
C2H2 Zn finger 565..583 CDD:275368
Zfp410NP_659082.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..113 7/28 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..214 2/26 (8%)
SFP1 <189..300 CDD:227516 31/170 (18%)
C2H2 Zn finger 221..243 CDD:275368 5/46 (11%)
C2H2 Zn finger 251..273 CDD:275368 8/54 (15%)
zf-H2C2_2 265..292 CDD:372612 11/60 (18%)
C2H2 Zn finger 281..303 CDD:275368 8/22 (36%)
zf-H2C2_2 295..321 CDD:372612 10/56 (18%)
C2H2 Zn finger 311..333 CDD:275368 11/50 (22%)
zf-H2C2_2 325..350 CDD:372612 10/27 (37%)
C2H2 Zn finger 341..361 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.