DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11696 and CG4854

DIOPT Version :9

Sequence 1:NP_572731.1 Gene:CG11696 / 32104 FlyBaseID:FBgn0030314 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_650860.1 Gene:CG4854 / 42391 FlyBaseID:FBgn0038766 Length:319 Species:Drosophila melanogaster


Alignment Length:342 Identity:73/342 - (21%)
Similarity:116/342 - (33%) Gaps:95/342 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 LDCAICAA--------PLE-DFND-LKRHFRVE---------HDCTGYVKCCNNRYKKRTLYVDH 345
            |.|.||..        |.| ||.| :||...||         ..||..........|.|:|    
  Fly    10 LKCRICLVQPKDESLMPTEPDFPDKIKRCTGVELSESPDWPNRICTSCALLLRAALKLRSL---- 70

  Fly   346 LHCHKDPQYFSCQSCRKNFLNRNSQVMHMLRFHSQQQELVHQCAICEARFAKKFLLTMHLKGHKG 410
                       ||...|:...:..|.:::...|.:|:             .||...:..|..::.
  Fly    71 -----------CQQTEKDLKEQKLQEINIEIVHDEQE-------------TKKKTESRDLSKNEA 111

  Fly   411 TERP-----EVCDTCSKTFRTKFELSAHVKRM------------------------------HAA 440
            |...     |..|:...|..:..:::.....:                              .||
  Fly   112 TGSDSELEYEYLDSYDVTLESSEDVACSADELVSIEPAISAPEESVYSLSPKPVTFEDEDSGQAA 176

  Fly   441 DFTPIICDICGTHFRSKANFLIHKKALHPDGPVAEVQCTLCGRWLRDERSLRKHLARHDDRDGDT 505
            .||   |:||...:..:.....|.|......|   .:|.:|.:..|....|.:|:..|   .|:.
  Fly   177 SFT---CNICNNVYSERVKLTNHMKVHSAKKP---HECEICHKRFRQTPQLARHMNTH---TGNR 232

  Fly   506 KYRCLLCNAEKSSRAALSSHMRYHHSAKRHKCSLCDKEFKLPRALAEHMATHTGIDLYQCQFCTR 570
            .|:|..|::..:..:....|.|.|.:.:.:||..|.:.|.....|..|:.||||...:.||:|.:
  Fly   233 PYKCDYCDSRFADPSTRIKHQRIHTNERPYKCEFCSRSFGYSNVLRVHLKTHTGERPFSCQYCQK 297

  Fly   571 TFKS--HANMH--NHKK 583
            :|..  |.|.|  :||:
  Fly   298 SFSQLHHKNSHEKSHKR 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11696NP_572731.1 zf-AD 2..78 CDD:285071
C2H2 Zn finger 332..349 CDD:275368 3/16 (19%)
C2H2 Zn finger 357..378 CDD:275368 4/20 (20%)
C2H2 Zn finger 388..408 CDD:275368 3/19 (16%)
C2H2 Zn finger 417..438 CDD:275368 2/50 (4%)
C2H2 Zn finger 447..465 CDD:275368 4/17 (24%)
C2H2 Zn finger 478..498 CDD:275368 5/19 (26%)
C2H2 Zn finger 509..529 CDD:275368 4/19 (21%)
C2H2 Zn finger 537..557 CDD:275368 5/19 (26%)
C2H2 Zn finger 565..583 CDD:275368 8/21 (38%)
CG4854NP_650860.1 zf-AD 12..>57 CDD:285071 14/44 (32%)
C2H2 Zn finger 180..200 CDD:275368 5/19 (26%)
zf-H2C2_2 193..217 CDD:290200 5/26 (19%)
COG5048 201..>258 CDD:227381 14/62 (23%)
C2H2 Zn finger 208..228 CDD:275368 5/19 (26%)
zf-H2C2_2 221..244 CDD:290200 7/25 (28%)
C2H2 Zn finger 236..256 CDD:275368 4/19 (21%)
zf-H2C2_2 251..273 CDD:290200 7/21 (33%)
C2H2 Zn finger 264..284 CDD:275368 5/19 (26%)
zf-H2C2_2 277..301 CDD:290200 10/23 (43%)
C2H2 Zn finger 292..312 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
00.000

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