DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11696 and M1BP

DIOPT Version :9

Sequence 1:NP_572731.1 Gene:CG11696 / 32104 FlyBaseID:FBgn0030314 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster


Alignment Length:574 Identity:112/574 - (19%)
Similarity:183/574 - (31%) Gaps:224/574 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CRLCLEDAEHGVPIFGQEPPMGQPAHRQLAELIERHLLLVLAENDVVSTCLCNRCWRQLAEIEQF 67
            ||:|.:.|.:     .:.|.:.:.::.::.:.||....|.|.....:...:|..|..:||     
  Fly    13 CRVCAKYASN-----KRSPKLFERSNTKMIDNIEALTGLRLENYGCLPDQICECCSMELA----- 67

  Fly    68 CSMVAEKQRSLHRSLQLKTELPELPELTEPEPALVVWNTESPIEPKLSYEGDDIKDHILCEPVID 132
             |.|..::|.:....:|...|.|     |....:..:.       :.:..|:||...:       
  Fly    68 -SAVKLRERCIAAQRELLLGLTE-----EQRQGISAFY-------RAAVMGEDIVQTV------- 112

  Fly   133 ALSAGDEKDSDYGDTFEPDFEPESQPDEEEEPEPDPVKPRPRGRPRKTALQQTHQIIKRKYEKRK 197
                                   ..||::|                   :..|:|.|..: |.::
  Fly   113 -----------------------KTPDDDE-------------------VYATYQEIVLE-EPKE 134

  Fly   198 QQNKAKITELSLRESRARQRELKRSSAGAEDD-----QDGDEDE---EDEEDVGGELTPDADEQP 254
            :.:..|:      |......|:....|| |||     ::.|.|.   ||||.   :.|.:.||. 
  Fly   135 EIDDTKV------EYDNTYYEVAEGHAG-EDDAASLIEEADYDSIMAEDEEQ---QQTLELDED- 188

  Fly   255 KPRGKRGRPKTKKLVTADDN-----DDTSEVPVKRSSIKEMDDYIAANVKL-DCAICAAPLEDFN 313
                       .:|:..|.|     |...||.|..:.:.  |:|...|:.: .|::...|....:
  Fly   189 -----------TELIVGDVNDAYVYDSDDEVAVLDNVLD--DEYEHENIVVKKCSLPPKPKVRSD 240

  Fly   314 DLKRHFRVEHDCTGYV---KCCNNRYKKRTLYVDHLHC--HKDPQYFSCQSCRKNFLNRNSQVMH 373
            |.:|.      .||.|   :.|.|..|.|..:  .|||  |:..:.|.|:               
  Fly   241 DARRR------GTGGVYICEQCGNHIKGRMAF--ELHCRRHRGDKQFGCE--------------- 282

  Fly   374 MLRFHSQQQELVHQCAICEARFAKKFLLTMHLKGHKGTERPEVCDTCSKTFRTKFELSAHVKRMH 438
                            :|::||.....|..|::.|.| |||..|..|.:.| |.:......:|.|
  Fly   283 ----------------LCQSRFCTTSELKRHMRKHTG-ERPFACKYCGRCF-TDYTTRVKHERTH 329

  Fly   439 AADFTPIICDICGTHFRSKANFLIHKKALHPDGPVAEVQCTLCGRWLRDERSLRKHLARHDDRDG 503
            ..: .|.:|..||..|                                                 
  Fly   330 TNE-RPYVCGTCGKAF------------------------------------------------- 344

  Fly   504 DTKYRCLLCNAEKSSRAALSSHMRYHHSAKRHKCSLCDKEFKLPRALAEHMATH 557
            .|.|             .|.:||..|...:.::|.||||.|.||    .|::||
  Fly   345 TTGY-------------ILKNHMLIHSGERAYRCELCDKSFMLP----THLSTH 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11696NP_572731.1 zf-AD 2..78 CDD:285071 16/74 (22%)
C2H2 Zn finger 332..349 CDD:275368 7/18 (39%)
C2H2 Zn finger 357..378 CDD:275368 1/20 (5%)
C2H2 Zn finger 388..408 CDD:275368 5/19 (26%)
C2H2 Zn finger 417..438 CDD:275368 5/20 (25%)
C2H2 Zn finger 447..465 CDD:275368 4/17 (24%)
C2H2 Zn finger 478..498 CDD:275368 0/19 (0%)
C2H2 Zn finger 509..529 CDD:275368 3/19 (16%)
C2H2 Zn finger 537..557 CDD:275368 9/19 (47%)
C2H2 Zn finger 565..583 CDD:275368
M1BPNP_649825.1 zf-AD 13..84 CDD:214871 16/81 (20%)
C2H2 Zn finger 253..273 CDD:275368 7/21 (33%)
COG5048 276..>331 CDD:227381 18/87 (21%)
C2H2 Zn finger 281..301 CDD:275368 6/50 (12%)
zf-H2C2_2 293..317 CDD:290200 10/25 (40%)
C2H2 Zn finger 309..329 CDD:275368 5/20 (25%)
zf-H2C2_2 324..346 CDD:290200 7/71 (10%)
C2H2 Zn finger 337..357 CDD:275368 9/81 (11%)
zf-H2C2_2 350..372 CDD:290200 9/21 (43%)
C2H2 Zn finger 365..383 CDD:275368 11/21 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
00.000

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