DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11696 and CG3407

DIOPT Version :9

Sequence 1:NP_572731.1 Gene:CG11696 / 32104 FlyBaseID:FBgn0030314 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_608809.1 Gene:CG3407 / 33606 FlyBaseID:FBgn0031573 Length:714 Species:Drosophila melanogaster


Alignment Length:513 Identity:101/513 - (19%)
Similarity:157/513 - (30%) Gaps:209/513 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 EPEPALVVWNTESPIEPKLSYEGDDIKDHILCEPVIDALS---AGDEKDSDYGDTFEPDFEPESQ 157
            ||.||     :..|..|.|. |...:.||:    .:|.||   |..::::....|.....||..|
  Fly   352 EPPPA-----SSEPATPLLK-ENPHVGDHM----ALDFLSPEKADPQEEAKLEKTLSKACEPNEQ 406

  Fly   158 -----PDEEEEPEPDPVKPRPRGRPRKTALQQTHQIIKRKYEKRKQQNKAKITELSLRESRARQR 217
                 |...:.| |.|..|     |..::::|..:                 :.|.|.|:...:.
  Fly   407 TLLVAPPACQTP-PIPTVP-----PANSSIEQLRR-----------------SPLELSEAFKLEE 448

  Fly   218 ELKRSSAGAEDDQDGDEDEEDEEDVGGELTPDADEQPKPRGKRGRPKTKKLVTADDNDDTSEVPV 282
            :....|..|...::||              |||:|.                     ::..::.|
  Fly   449 DDMTDSRPASSFEEGD--------------PDAEEP---------------------NECFQMEV 478

  Fly   283 KRSSIKEMDDYIAANVKLDCAICAAPLEDFNDLKR-HFRVEHDCTGYVKCCNNRYKKRTLYVDHL 346
            ..:|:.|                    |..|..:| ||                           
  Fly   479 LDTSLTE--------------------EAENKTRRKHF--------------------------- 496

  Fly   347 HCHKDPQYFSCQSCRKNFLNRNSQVMHMLRFH--SQQQELVHQCAICEARFAKKFLLTMHLKGHK 409
                      |..|.::|.:.|:     |::|  :..||..|:|..||..|..:..|..|.:.|.
  Fly   497 ----------CDKCNRDFNSYNA-----LKYHQYTHNQERSHKCDSCERSFYTQSALKAHERTHS 546

  Fly   410 GTERPEVCDTCSKTFRTKFELSAHVKRMHAADFTPIICDICGTHFRSKANFLIHKKALHPDGPVA 474
            |. :|..||.|...||...:|..|:...| :|....:|:.||..|                    
  Fly   547 GV-KPFKCDKCEFQFRQWGDLKYHIISRH-SDVKAHMCEFCGKSF-------------------- 589

  Fly   475 EVQCTLCGRWLRDERSLRKHLARHDDRDGDTKYRCLLCNAEKSSRAALSSHMRYHHSAKRHKCSL 539
                                                      |.|.:|..|.|.|...|.:.|..
  Fly   590 ------------------------------------------SRRYSLVVHRRIHTREKNYACQY 612

  Fly   540 CDKEFKLPRALAEHMATHTGIDLYQCQFCTRTFKSHANMHNHKKKMHPNDWVRKYSQP 597
            |||.|:....|..|:..|||...|:|..|.:.|:...::..|.:...|:    :.|||
  Fly   613 CDKTFRASSYLLSHIKVHTGERPYECSICEKKFRVSGDLKRHSRIHDPS----RTSQP 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11696NP_572731.1 zf-AD 2..78 CDD:285071
C2H2 Zn finger 332..349 CDD:275368 0/16 (0%)
C2H2 Zn finger 357..378 CDD:275368 5/20 (25%)
C2H2 Zn finger 388..408 CDD:275368 6/19 (32%)
C2H2 Zn finger 417..438 CDD:275368 7/20 (35%)
C2H2 Zn finger 447..465 CDD:275368 4/17 (24%)
C2H2 Zn finger 478..498 CDD:275368 0/19 (0%)
C2H2 Zn finger 509..529 CDD:275368 5/19 (26%)
C2H2 Zn finger 537..557 CDD:275368 7/19 (37%)
C2H2 Zn finger 565..583 CDD:275368 4/17 (24%)
CG3407NP_608809.1 COG5048 <494..656 CDD:227381 55/267 (21%)
C2H2 Zn finger 497..517 CDD:275368 6/24 (25%)
zf-H2C2_2 509..534 CDD:290200 9/29 (31%)
C2H2 Zn finger 525..545 CDD:275368 6/19 (32%)
zf-H2C2_2 537..562 CDD:290200 9/25 (36%)
C2H2 Zn finger 555..574 CDD:275371 5/18 (28%)
zf-C2H2 580..602 CDD:278523 9/83 (11%)
C2H2 Zn finger 582..602 CDD:275368 9/81 (11%)
zf-H2C2_2 594..617 CDD:290200 9/22 (41%)
C2H2 Zn finger 610..630 CDD:275368 7/19 (37%)
zf-H2C2_2 622..645 CDD:290200 8/22 (36%)
zf-C2H2 636..658 CDD:278523 5/21 (24%)
C2H2 Zn finger 638..658 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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