DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11696 and CG8944

DIOPT Version :10

Sequence 1:NP_572731.1 Gene:CG11696 / 32104 FlyBaseID:FBgn0030314 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster


Alignment Length:742 Identity:152/742 - (20%)
Similarity:244/742 - (32%) Gaps:293/742 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 ELP---ELPELTEPEPALVVWNTESPIEPKLSYEGDDIKDHILCEPVIDALSAGDEKDSDYGDTF 148
            :||   |:.:||:.:.||        :||::..: .:::| :.|..  |.:.||:|.|.:.... 
  Fly    88 DLPNFHEIEDLTDADTAL--------LEPQMVIK-QELQD-LPCSD--DDVVAGEEDDDEQRLN- 139

  Fly   149 EPDFEPESQPDEEEEPEPDPVKPRPRGRPRKTALQQTHQIIKRKYEKRKQQNKAKITELSLRESR 213
                  :|:.||:|...|:...|                ::..|...||     |:|       :
  Fly   140 ------DSEADEDEAILPESDVP----------------VVSSKTRARK-----KVT-------K 170

  Fly   214 ARQRELKRSSAGAED-----DQDGDEDEEDEEDVGGE---------------------------- 245
            .|||::......|.|     |..||.|....:|..||                            
  Fly   171 QRQRDMSSELLIAGDGDSSMDDYGDPDHSYMDDNSGEYMDFAGFDGVNHSGFGTESDFLSYDEMV 235

  Fly   246 ---------------------------------LTPDADEQPKPRGKRGR--------------- 262
                                             |....:.|.:.|.||.|               
  Fly   236 EESLLGRDREVTMHIKDRKMIQFLIHSYQRNPFLWDHGNAQFRDRVKRARFLDWIVLEFKSRFNI 300

  Fly   263 PKTKKLVTAD-DN------DDTSEVPVKRSSI------KE---MDDYIAANVKLDCAICAAPLED 311
            ...|..:|.. ||      .:.:.:.:::::|      ||   :::..:.|.|:..|:...    
  Fly   301 SLAKDAITRKWDNLRTVYKRECNRMALEKTNISTLWYFKELHFLNEVYSYNDKMSDAVVKE---- 361

  Fly   312 FNDLKRHFRVEHDCTGYVK---------CCNNRYKKRTLYVDHLHCHKDPQYFSCQSCRKNFLNR 367
             ...:|.|....:.|...|         |..||:              ||.|.|.:        |
  Fly   362 -TSYRRRFSAIWNDTSTAKLLSMVKRYQCFYNRF--------------DPDYRSKE--------R 403

  Fly   368 NSQVMH----------------------MLRFHSQQQELVHQCAICEARFAKKFLLT------MH 404
            ..:.:|                      .|||...:|::..   :...|..|||:..      ||
  Fly   404 RGEGLHQMAIELQQLIDVTTIQISKRISQLRFDYSKQKMER---LNSERLGKKFIANYLYYDQMH 465

  Fly   405 -----------------------LKGHKGTERPEV-----CDTCSKTFRTKFELSAHVKRMHAAD 441
                                   |..|..|.:|.:     |:.||..|....|...| |::|...
  Fly   466 FMDDDIPPFKCAHCPEIVQTLRELDLHMLTHQPSLGGGYYCNICSIQFHNAQEFDNH-KQLHLGG 529

  Fly   442 FTPI--ICDICGTHFRSKANFLIHKK-----------ALH---PDGPVAEVQCTLCGRWLRDERS 490
            .|.|  .|::|...||.|||:..|.:           ||:   .:|.:.:.:..:.|...|...|
  Fly   530 VTEIKFNCELCTASFREKANYDEHLRRHNEELFLPSLALNHSIMEGGLGDDEIGVEGEESRGSGS 594

  Fly   491 LRK--HLAR-------HDDRDGD--------------TKYRCLLCNAEKSSRAALSSHMRYHHSA 532
            .||  |.|:       .|||.|.              ..|.|.:|....::...|::| |..|..
  Fly   595 RRKRRHAAKATDDMVDDDDRIGGGGGGGSGGGGTDIAKPYGCDVCRRSFATPGHLNAH-RIVHQD 658

  Fly   533 KRHKCSLCD-----KEFKLPRALAEHMATHTGIDLYQCQFCTRTFKSHANMHNHKKKMHPNDWVR 592
            :|.:|..||     |.|....:|.||:..|...:.::|..|.:||||..|:.|| |::|  |.::
  Fly   659 ERERCYKCDYPQCNKSFVARNSLFEHLKQHYSNEEFKCDICGKTFKSTKNLQNH-KQIH--DKIK 720

  Fly   593 KY-SQPSSSITSTAAPL-AHPNHPNQP 617
            :| .|...|..:.||.| .|....|:|
  Fly   721 RYVCQICGSAFAQAAGLYLHKRRHNRP 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11696NP_572731.1 zf-AD 2..81 CDD:462262
C2H2 Zn finger 332..349 CDD:275368 2/16 (13%)
C2H2 Zn finger 357..378 CDD:275368 4/42 (10%)
C2H2 Zn finger 388..408 CDD:275368 7/48 (15%)
C2H2 Zn finger 417..438 CDD:275368 7/20 (35%)
C2H2 Zn finger 447..465 CDD:275368 8/17 (47%)
C2H2 Zn finger 478..498 CDD:275368 7/28 (25%)
C2H2 Zn finger 509..529 CDD:275368 5/19 (26%)
zf-H2C2_2 521..545 CDD:463886 9/28 (32%)
C2H2 Zn finger 537..557 CDD:275368 8/24 (33%)
C2H2 Zn finger 565..583 CDD:275368 9/17 (53%)
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:463144 13/84 (15%)
MADF 379..472 CDD:214738 20/117 (17%)
C2H2 Zn finger 476..496 CDD:275368 2/19 (11%)
C2H2 Zn finger 506..526 CDD:275368 7/20 (35%)
C2H2 Zn finger 537..557 CDD:275368 8/19 (42%)
C2H2 Zn finger 636..656 CDD:275368 5/20 (25%)
COG5048 <666..734 CDD:227381 23/70 (33%)
C2H2 Zn finger 666..688 CDD:275368 7/21 (33%)
C2H2 Zn finger 696..716 CDD:275368 10/20 (50%)
C2H2 Zn finger 724..744 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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