DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11696 and klf-3

DIOPT Version :9

Sequence 1:NP_572731.1 Gene:CG11696 / 32104 FlyBaseID:FBgn0030314 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001022205.1 Gene:klf-3 / 191713 WormBaseID:WBGene00003480 Length:315 Species:Caenorhabditis elegans


Alignment Length:117 Identity:36/117 - (30%)
Similarity:54/117 - (46%) Gaps:13/117 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   356 SCQSCRKNFLNRNSQVMHMLRFHSQQQELVHQCAI--CEARFAKKFLLTMHLKGHKGT---ERPE 415
            |..|..::.|.|.|::....|..:.::.:||.|..  |    .||:..:.|||.|:.|   |:|.
 Worm   200 STTSSERSPLQRKSRIESNKRNPTDKKFVVHACTYPGC----FKKYSKSSHLKAHERTHSGEKPF 260

  Fly   416 VC--DTCSKTFRTKFELSAHVKRMHAADFTPIICDICGTHFRSKANFLIHKK 465
            ||  ..||..|....||:.|: |.|..| .|..|.:|..:|....:..:|.|
 Worm   261 VCKWQNCSWKFARSDELTRHM-RKHTGD-KPFRCSLCDRNFARSDHLSLHMK 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11696NP_572731.1 zf-AD 2..78 CDD:285071
C2H2 Zn finger 332..349 CDD:275368
C2H2 Zn finger 357..378 CDD:275368 5/20 (25%)
C2H2 Zn finger 388..408 CDD:275368 7/21 (33%)
C2H2 Zn finger 417..438 CDD:275368 8/22 (36%)
C2H2 Zn finger 447..465 CDD:275368 4/17 (24%)
C2H2 Zn finger 478..498 CDD:275368
C2H2 Zn finger 509..529 CDD:275368
C2H2 Zn finger 537..557 CDD:275368
C2H2 Zn finger 565..583 CDD:275368
klf-3NP_001022205.1 C2H2 Zn finger 235..254 CDD:275368 7/22 (32%)
C2H2 Zn finger 262..284 CDD:275368 8/22 (36%)
zf-H2C2_2 276..301 CDD:290200 10/26 (38%)
C2H2 Zn finger 292..312 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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