DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11696 and hinf-1

DIOPT Version :10

Sequence 1:NP_572731.1 Gene:CG11696 / 32104 FlyBaseID:FBgn0030314 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_493579.2 Gene:hinf-1 / 173348 WormBaseID:WBGene00009553 Length:541 Species:Caenorhabditis elegans


Alignment Length:538 Identity:110/538 - (20%)
Similarity:172/538 - (31%) Gaps:157/538 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 DFEPESQPDEEEEP--------EPDPVKP--RPRGRPRKTALQQTHQIIKRKYEKRKQQNK---- 201
            ||:.:.||..:..|        ||||...  .|...|........||..:..:.....|:.    
 Worm    12 DFDIQYQPSSQHPPYYNSFGIAEPDPRHNLYAPTAPPHHHHHHHQHQPQQHLHYMIDSQDSDSQD 76

  Fly   202 -----------AKITELSLRESRARQRELKRSSAGAEDDQDGDEDEEDEEDVGGELTPDADEQPK 255
                       :..|..|....||       |.|.:.|.:.|:..||    |.....|       
 Worm    77 SVDSFRTPAPISSATRFSTHTPRA-------SRASSNDSESGELSEE----VMNHWLP------- 123

  Fly   256 PRGKRGRPKTKKLVTADDNDDTSEV---------PVKRSSIK-EMDDYIAANVK----------- 299
                        :...:.:.|..:|         .|..||.| |..|::..:|.           
 Worm   124 ------------MTWCERSSDDPQVFTFVCLWGQCVSSSSSKDEFVDHLFGHVSVIEEGVQNGNH 176

  Fly   300 ---LDCAI--CAAPLEDFNDLKRHFRV---EHDC-------------------TGYVKCCNNRYK 337
               :.|.:  |...|:....|.||..:   :.||                   .|:..|.|..|:
 Worm   177 MNTVQCKVRGCNKHLDSIFQLHRHVSMHVFQADCQQKGSEALIEKEDYIGIESCGFEPCTNINYE 241

  Fly   338 ----------------KRTLYVDHLHCHKDPQYFSCQSCRKNFLNRNSQVMHMLRFHSQQQELVH 386
                            ..|...||:..|.| ........::||.|.:.:|:...::         
 Worm   242 GMLLNCQWEDCGMPFNSLTELFDHVGHHID-GVGDVDRIQQNFSNGDKKVVFPCKW--------- 296

  Fly   387 QCAICEARFAKKFLLTMHLKGHKGTERPEVCDTCSKTFRTKFELSAH-------VKRMHAADFTP 444
              ..|......|..|..|.:.|.| |:...|..|::.|..:.:|..|       :|.....|  |
 Worm   297 --TACTQVADSKANLRRHARHHSG-EKVLACPFCARFFSRRDKLYDHCLRRTILMKNPEMED--P 356

  Fly   445 IICDICGTHFRSKANFLIHKKAL--HPDGPVAEVQCTLCGRWLRDERSLRKHL-ARHDDRDGDTK 506
            .:|.:|...|.:       :|||  |....:..:.|.||...|.....|.:|| .:|..|..|  
 Worm   357 YLCKLCQKRFGT-------EKALCMHVTRHLVSLTCPLCSLGLGCRAELHRHLMTKHSRRSKD-- 412

  Fly   507 YRCLLCNAEKSSRAALSSHMRYHHSAKRHKCSLCDKEFKLPRALAEHMATHT---GIDLYQCQFC 568
            ::|..|:....:.:.|:.|..| ||...:.|..|.::||..:.|.:||..|.   ....|.|..|
 Worm   413 FKCDTCSKLFFTESELNRHAVY-HSDVMYSCKHCPEKFKWKKQLMKHMKEHDENFNPSPYTCHLC 476

  Fly   569 TRTFKSHANMHNHKKKMH 586
            .||:.:...:..|..:.|
 Worm   477 DRTYTTGFALGRHLTRQH 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11696NP_572731.1 zf-AD 2..81 CDD:462262
C2H2 Zn finger 332..349 CDD:275368 5/32 (16%)
C2H2 Zn finger 357..378 CDD:275368 4/20 (20%)
C2H2 Zn finger 388..408 CDD:275368 4/19 (21%)
C2H2 Zn finger 417..438 CDD:275368 6/27 (22%)
C2H2 Zn finger 447..465 CDD:275368 3/17 (18%)
C2H2 Zn finger 478..498 CDD:275368 7/20 (35%)
C2H2 Zn finger 509..529 CDD:275368 4/19 (21%)
zf-H2C2_2 521..545 CDD:463886 7/23 (30%)
C2H2 Zn finger 537..557 CDD:275368 7/19 (37%)
C2H2 Zn finger 565..583 CDD:275368 5/17 (29%)
hinf-1NP_493579.2 C2H2 Zn finger 299..316 CDD:275368 4/16 (25%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
C2H2 Zn finger 359..379 CDD:275368 7/26 (27%)
C2H2 Zn finger 385..406 CDD:275368 7/20 (35%)
C2H2 Zn finger 415..435 CDD:275368 5/20 (25%)
C2H2 Zn finger 442..462 CDD:275368 7/19 (37%)
C2H2 Zn finger 473..494 CDD:275368 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.