DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Reepl1 and HVA22J

DIOPT Version :10

Sequence 1:NP_572730.1 Gene:Reepl1 / 32103 FlyBaseID:FBgn0030313 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_565832.1 Gene:HVA22J / 818175 AraportID:AT2G36020 Length:258 Species:Arabidopsis thaliana


Alignment Length:245 Identity:49/245 - (20%)
Similarity:98/245 - (40%) Gaps:40/245 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIYAIVIHILSLLVGCFYPAFASYKILKSQNCSVNDLRGWLIYWIAYGVYVAFDYFTAGLLAFIP 65
            |:...:|.:|.|::|..||||..:|.::.....:.:||.|..|||...:..:|:......::::|
plant     1 MLGDFIIRLLVLILGYTYPAFECFKTVEKNKVDIEELRFWCQYWILLALISSFERVGDFFISWLP 65

  Fly    66 LLSEFKVLLLFWMLPSVGGGSEVIYEEFLRSFSCNESFDQVLGRITLEWGELVWQQVCSVLSHL- 129
            |..|.||:...::......|:..:||..|:.:......:  :.|..:|.....|.......::. 
plant    66 LYGEMKVVFFVYLWYPKTKGTRHVYETLLKPYMAQHETE--IDRKIMELRARAWDFFIFYFNNFA 128

  Fly   130 ------MVLADRYLLPSGHRPALQITPSIEDLVNDAIAKRQLEEKRKQMGNLSDTINEVLGENID 188
                  ::...:|:|....|            .:.|.|.:...|:...|...|.         ::
plant   129 QAGQSTLIQGFQYVLAQSVR------------FSAAAANQPPTERNVNMNAQSP---------VE 172

  Fly   189 LNMD--------LLHGSESDLLVIKEPISKPKE--RPIPPPKPMRQPSSS 228
            ::.|        .|:.|.|.|..:::..|:.::  .|.|||.|.|..:.:
plant   173 MDNDPPSPRAPRPLNKSLSALRSLEKQTSRGRKWPPPTPPPTPGRDSAGT 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Reepl1NP_572730.1 TB2_DP1_HVA22 19..97 CDD:460820 20/77 (26%)
HVA22JNP_565832.1 TB2_DP1_HVA22 19..97 CDD:460820 20/77 (26%)

Return to query results.
Submit another query.