DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Reepl1 and REEP4

DIOPT Version :10

Sequence 1:NP_572730.1 Gene:Reepl1 / 32103 FlyBaseID:FBgn0030313 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_079508.2 Gene:REEP4 / 80346 HGNCID:26176 Length:257 Species:Homo sapiens


Alignment Length:258 Identity:54/258 - (20%)
Similarity:105/258 - (40%) Gaps:67/258 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIYAIVIHILSLLVGCFYPAFASYKILKSQNCSVNDLRGWLIYWIAYGVYVAFDYFTAGLLAFIP 65
            |:..::..::.|:.|...||:||||.:|::|  :.:...|::|||.:.:::|.:..|...:::.|
Human     1 MVSWMICRLVVLVFGMLCPAYASYKAVKTKN--IREYVRWMMYWIVFALFMAAEIVTDIFISWFP 63

  Fly    66 LLSEFKVLLLFWMLPSVGGGSEVIYEEFLR-SFSCNE-------------SFDQVLG-------- 108
            ...|.|:..:.|:|.....|:.::|.:|:. |.|.:|             |::.||.        
Human    64 FYYEIKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDAYIVQAKERSYETVLSFGKRGLNI 128

  Fly   109 -------RITLEWGELVWQQVCSVLSHLMVLADRYLLPSGHRPALQITPSIEDLVNDAIAKRQLE 166
                   ..|...|.|..:.....:..|..::|. ..|:.|.|..     :||         |:.
Human   129 AASAAVQAATKSQGALAGRLRSFSMQDLRSISDA-PAPAYHDPLY-----LED---------QVS 178

  Fly   167 EKRKQMG------NLSDTINEVLGENIDLNMDLLHGSESDLLVIKEPISKPKERPIPPPKPMR 223
            .:|..:|      ..|||.:|..               ||...:....::|:|:|:...:.:|
Human   179 HRRPPIGYRAGGLQDSDTEDECW---------------SDTEAVPRAPARPREKPLIRSQSLR 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Reepl1NP_572730.1 TB2_DP1_HVA22 19..97 CDD:460820 22/78 (28%)
REEP4NP_079508.2 TB2_DP1_HVA22 19..94 CDD:460820 22/76 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..257 11/59 (19%)

Return to query results.
Submit another query.