DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reepl1 and reep4

DIOPT Version :10

Sequence 1:NP_572730.1 Gene:Reepl1 / 32103 FlyBaseID:FBgn0030313 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_001016224.1 Gene:reep4 / 548978 XenbaseID:XB-GENE-982259 Length:261 Species:Xenopus tropicalis


Alignment Length:275 Identity:59/275 - (21%)
Similarity:110/275 - (40%) Gaps:59/275 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIYAIVIHILSLLVGCFYPAFASYKILKSQNCSVNDLRGWLIYWIAYGVYVAFDYFTAGLLAFIP 65
            |:..|:...:.|:.|..|||:||||.:|::|  |.:...|::|||.:.:::..:.||...:|:.|
 Frog     1 MVSWIISRAVVLVFGLLYPAYASYKAVKTKN--VREYVRWMMYWIVFALFMTVETFTDIFIAWFP 63

  Fly    66 LLSEFKVLLLFWMLPSVGGGSEVIYEEFL--------------------RSFSCNESFDQVLGR- 109
            ...|.|:..:.|:|.....|:.::|.:.:                    ||:   |||..: || 
 Frog    64 FYYEIKMAFVVWLLSPYTRGASLLYRKCIHPTLSLKEKEIDSYIIQAKERSY---ESFVNI-GRK 124

  Fly   110 ------------ITLEWGELVWQQVCSVLSHLMVLADRYLLPSGHRPALQIT-----------PS 151
                        .|...|.||.:.....:..|..|.|.  .|..:|.||...           |:
 Frog   125 GLNIAASAAVQAATKGQGALVGRLRSFSMQDLRALPDD--TPIHYRDALYPDAPELHRRPIGYPT 187

  Fly   152 IEDLVNDAIAKRQLEEKRKQMGNLSDTINEVLGENIDLNMDLLHGSESDLLVIKEPISKPKERPI 216
            .....:|::.:|..:.:..:....:.|...:..:.       |..|:|..:..|:.:|:......
 Frog   188 TSHADSDSMDERWSDSEMAETRTAARTRGGMPSKP-------LQRSQSLRVSKKKGLSREVSTKT 245

  Fly   217 PPPKPMRQPSSSNQQ 231
            ..||..::|:.|..:
 Frog   246 TKPKGKKKPAQSEPE 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Reepl1NP_572730.1 TB2_DP1_HVA22 19..97 CDD:460820 24/97 (25%)
reep4NP_001016224.1 TB2_DP1_HVA22 19..94 CDD:460820 23/76 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 177..261 13/91 (14%)

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