DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reepl1 and reep6

DIOPT Version :10

Sequence 1:NP_572730.1 Gene:Reepl1 / 32103 FlyBaseID:FBgn0030313 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_001016051.1 Gene:reep6 / 548805 XenbaseID:XB-GENE-974921 Length:202 Species:Xenopus tropicalis


Alignment Length:155 Identity:45/155 - (29%)
Similarity:72/155 - (46%) Gaps:12/155 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIYAIVIHILSLLVGCFYPAFASYKILKSQNCSVNDLRGWLIYWIAYGVYVAFDYFTAGLLAFIP 65
            :|:.....::..|:|..|||:.|.|.::|.:...:.:  ||.||:.|||:...::|:...|.:.|
 Frog    48 LIFGYGASLVCNLIGFVYPAYVSVKAIESPDKKDDTI--WLTYWVVYGVFSVVEFFSDIFLFWFP 110

  Fly    66 LLSEFKVLLLFW-MLPSVGGGSEVIYEEFLRSF--SCNESFDQV---LGRITLEWGELVWQQVCS 124
            .....|...|.| |.|....||:::|:.|:|.|  ..:.:.|.|   ||...|...|.|.:.|..
 Frog   111 FYYLGKCCFLLWCMAPFSWNGSQILYDRFIRPFFLKHHRTVDSVVSDLGGQALNTAESVTRGVLH 175

  Fly   125 VLSHLMVLADRYLLPSGHRPALQIT 149
            .|:....|..|    .|.:.||..|
 Frog   176 TLTSSRTLLAR----EGGQQALPST 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Reepl1NP_572730.1 TB2_DP1_HVA22 19..97 CDD:460820 25/78 (32%)
reep6NP_001016051.1 TB2_DP1_HVA22 66..143 CDD:460820 25/78 (32%)

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