DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reepl1 and reep3b

DIOPT Version :10

Sequence 1:NP_572730.1 Gene:Reepl1 / 32103 FlyBaseID:FBgn0030313 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_956455.1 Gene:reep3b / 393130 ZFINID:ZDB-GENE-040426-730 Length:256 Species:Danio rerio


Alignment Length:94 Identity:28/94 - (29%)
Similarity:51/94 - (54%) Gaps:2/94 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIYAIVIHILSLLVGCFYPAFASYKILKSQNCSVNDLRGWLIYWIAYGVYVAFDYFTAGLLAFIP 65
            |:..::...:.|:.|..|||:.|||.:|::|  |.:...|::|||.:.::...:......:|:.|
Zfish     1 MVSWMISRSVVLVFGNLYPAYYSYKAVKTKN--VKEYVRWMMYWIVFALFTVVETVADLTIAWFP 63

  Fly    66 LLSEFKVLLLFWMLPSVGGGSEVIYEEFL 94
            |..|.|:..:.|:|.....|:.|||.:.|
Zfish    64 LYYEIKIAFVIWLLSPYTRGASVIYRKAL 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Reepl1NP_572730.1 TB2_DP1_HVA22 19..97 CDD:460820 24/76 (32%)
reep3bNP_956455.1 TB2_DP1_HVA22 19..95 CDD:460820 24/76 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 177..256
Blue background indicates that the domain is not in the aligned region.

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