DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Reepl1 and Reep3

DIOPT Version :10

Sequence 1:NP_572730.1 Gene:Reepl1 / 32103 FlyBaseID:FBgn0030313 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_001191844.1 Gene:Reep3 / 28193 MGIID:88930 Length:267 Species:Mus musculus


Alignment Length:254 Identity:52/254 - (20%)
Similarity:92/254 - (36%) Gaps:73/254 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIYAIVIHILSLLVGCFYPAFASYKILKSQNCSVNDLRGWLIYWIAYGVYVAFDYFTAGLLAFIP 65
            |:..::...:.|:.|..|||:.|||.:|::|  |.:...|::|||.:.:|...:......||:.|
Mouse     1 MVSWMISRAVVLVFGMLYPAYYSYKAVKTKN--VKEYVRWMMYWIVFALYTVIETVADQTLAWFP 63

  Fly    66 LLSEFKVLLLFWMLPSVGGGSEVIYEEFLRSFSCNESFDQVLGRITLEWGELVWQQVCSVLSHLM 130
            |..|.|:..:.|:|.....|:.:||.:||.                            .:||...
Mouse    64 LYYELKIAFVIWLLSPYTRGASLIYRKFLH----------------------------PLLSSKE 100

  Fly   131 VLADRYLLPSGHRPALQITPSIEDLVN------DAIAKRQLEEKRKQMGNLSDTINEVLGENIDL 189
            ...|.|::.:..|       ..|.:||      :..|...:....|..|.:::.:...       
Mouse   101 REIDDYIVQAKER-------GYETMVNFGRQGLNLAAAAAVTAAVKSQGAITERLRSF------- 151

  Fly   190 NMDLLHGSESDLLVIK--EPISKPKERPIPPPK--------------PMRQPSSSNQQE 232
                   |..||..|:  ||:.....:.:|..|              |::..|....:|
Mouse   152 -------SMHDLTAIQGDEPVGHRPYQTLPEAKRKGKQATESPAYGIPLKDGSEQTDEE 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Reepl1NP_572730.1 TB2_DP1_HVA22 19..97 CDD:460820 26/77 (34%)
Reep3NP_001191844.1 TB2_DP1_HVA22 19..95 CDD:460820 26/105 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..232 7/42 (17%)

Return to query results.
Submit another query.