DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Reepl1 and REEP3

DIOPT Version :10

Sequence 1:NP_572730.1 Gene:Reepl1 / 32103 FlyBaseID:FBgn0030313 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_001001330.1 Gene:REEP3 / 221035 HGNCID:23711 Length:255 Species:Homo sapiens


Alignment Length:236 Identity:51/236 - (21%)
Similarity:92/236 - (38%) Gaps:59/236 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIYAIVIHILSLLVGCFYPAFASYKILKSQNCSVNDLRGWLIYWIAYGVYVAFDYFTAGLLAFIP 65
            |:..::...:.|:.|..|||:.|||.:|::|  |.:...|::|||.:.:|...:......:|:.|
Human     1 MVSWMISRAVVLVFGMLYPAYYSYKAVKTKN--VKEYVRWMMYWIVFALYTVIETVADQTVAWFP 63

  Fly    66 LLSEFKVLLLFWMLPSVGGGSEVIYEEFLRSFSCNESFDQVLGRITLEWGELVWQQVCSVLSHLM 130
            |..|.|:..:.|:|.....|:.:||.:||.                            .:||...
Human    64 LYYELKIAFVIWLLSPYTKGASLIYRKFLH----------------------------PLLSSKE 100

  Fly   131 VLADRYLLPSGHRPALQITPSIEDLVN------DAIAKRQLEEKRKQMGNLSDTINEVLGENIDL 189
            ...|.|::.:..|       ..|.:||      :..|...:....|..|.:::.:...       
Human   101 REIDDYIVQAKER-------GYETMVNFGRQGLNLAATAAVTAAVKSQGAITERLRSF------- 151

  Fly   190 NMDLLHGSESDLLVIK--EPISKPKERPIPPPKPMRQPSSS 228
                   |..||..|:  ||:.:...:|:|..|...:|:.|
Human   152 -------SMHDLTTIQGDEPVGQRPYQPLPEAKKKSKPAPS 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Reepl1NP_572730.1 TB2_DP1_HVA22 19..97 CDD:460820 25/77 (32%)
REEP3NP_001001330.1 TB2_DP1_HVA22 19..95 CDD:460820 25/105 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 158..242 8/28 (29%)

Return to query results.
Submit another query.