DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reepl1 and T19C3.4

DIOPT Version :10

Sequence 1:NP_572730.1 Gene:Reepl1 / 32103 FlyBaseID:FBgn0030313 Length:240 Species:Drosophila melanogaster
Sequence 2:NP_497221.1 Gene:T19C3.4 / 175216 WormBaseID:WBGene00020562 Length:229 Species:Caenorhabditis elegans


Alignment Length:228 Identity:51/228 - (22%)
Similarity:100/228 - (43%) Gaps:42/228 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ILSLLVGCFYPAFASYKILKSQNCSVNDLRGWLIYWIAYGVYVAFDYFTAGLLAF-IPLLSEFKV 72
            :|.:..|..|||:.|||.:::::  ..:...|::|||.:.:|...:.....:||| .|...:.|:
 Worm     8 LLIITAGTLYPAYRSYKAVRTKD--TREYVKWMMYWIVFAIYSFLENLLDLVLAFWFPFYFQLKI 70

  Fly    73 LLLFWMLPSVGGGSEVIYEEFLRSFSCN---ESFDQVLGRITLEWGELVWQQVCSVLSHLMVLAD 134
            :.:||:|.....|:.::|.:::.. :.|   :..|.:|.....|    .:.|:..:.|..:|.|.
 Worm    71 VFIFWLLSPWTKGASILYRKWVHP-TLNRHEKDIDALLESAKSE----SYNQLMRIGSKSLVYAK 130

  Fly   135 RYLLPSGHRPALQITPSIED--LVNDAIAKRQLEEKRKQMGNLSDTINEVLGENIDLNMDLLHGS 197
            ..:..:..|...|:...::.  ..||..::|:.         |:..||.|..|.:|.|      |
 Worm   131 DVVAEAAVRGQQQLVNQLQRSYSANDVGSEREA---------LTKNINIVKIEELDEN------S 180

  Fly   198 ESDLLVIKEPISKPKERPIPPPKPMRQPSSSNQ 230
            ::||.              ..|:|.|:.||.::
 Worm   181 DTDLQ--------------KSPRPRRRASSRSR 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Reepl1NP_572730.1 TB2_DP1_HVA22 19..97 CDD:460820 20/78 (26%)
T19C3.4NP_497221.1 TB2_DP1_HVA22 18..94 CDD:460820 20/77 (26%)

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