DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment RpII215 and ubxn7

DIOPT Version :9

Sequence 1:	NP_511124.1	Gene:	RpII215 / 32100	FlyBaseID:	FBgn0003277	Length:	1887	Species:	Drosophila melanogaster
Sequence 2:	NP_001001951.1	Gene:	ubxn7 / 402913	ZFINID:	ZDB-GENE-040704-8	Length:	505	Species:	Danio rerio

Alignment Length:	125	Identity:	30/125 - (24%)
Similarity:	37/125 - (29%)	Gaps:	30/125 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly  1747 YSQTGVKYSPTSPTYSPPSP--------SYDGSPG-------------SPQYTPGSPQYSPASPK 1790
            |..|..|....|...|...|        |.|||..             |.:..|.:...|||..:
Zfish   305 YESTQEKAESRSDDDSDAEPFSDSEGLISVDGSDNEAGAGEDSLDGHTSTELAPPTRSDSPAHHR 369

  Fly  1791 YSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTA 1850
            .||...|.  ...:.|..|...|.|..:..|.       ...:..||...|:.|..|.||
Zfish   370 KSPHKELC--HRKEESKKNHLEPVGLNHGQTG-------QTENHRSTSQQPSEPAGTSTA 420

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RpII215	NP_511124.1	PRK08566	14..887	CDD:236292
		RNAP_II_RPB1_N	15..868	CDD:259848
		RNA_pol_Rpb1_5	822..1420	CDD:282807
		RNA_pol_Rpb1_6	890..1071	CDD:282801
		RNAP_II_Rpb1_C	1050..1468	CDD:132720
		TCRP1	1602..1880	CDD:291605	30/125 (24%)
		RCR	<1789..1864	CDD:304939	15/62 (24%)
ubxn7	NP_001001951.1	UBA_UBXD7	15..50	CDD:270530
		UAS	151..263	CDD:239256
		UBQ	424..505	CDD:294102
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0086
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900