DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SA and pglyrp1

DIOPT Version :10

Sequence 1:NP_572727.1 Gene:PGRP-SA / 32099 FlyBaseID:FBgn0030310 Length:203 Species:Drosophila melanogaster
Sequence 2:XP_012823786.1 Gene:pglyrp1 / 548492 XenbaseID:XB-GENE-491319 Length:214 Species:Xenopus tropicalis


Alignment Length:164 Identity:66/164 - (40%)
Similarity:93/164 - (56%) Gaps:0/164 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 NCPTIKLKRQWGGKPSLGLHYQVRPIRYVVIHHTVTGECSGLLKCAEILQNMQAYHQNELDFNDI 100
            :||||..|.||||:.:........|:.||:||||....||....|....:::|.||.|...:.|:
 Frog    49 SCPTILTKAQWGGRAATCRTAMTTPVPYVIIHHTAGAHCSSQTSCISQAKSIQNYHMNSNAWCDV 113

  Fly   101 SYNFLIGNDGIVYEGTGWGLRGAHTYGYNAIGTGIAFIGNFVDKLPSDAALQAAKDLLACGVQQG 165
            .|:||:|.||.||||.||...|||...||:...||:.:|.:.:..|:.||..|.|:|::|||.:|
 Frog   114 GYSFLVGEDGNVYEGRGWNSVGAHAPNYNSNSIGISVMGTYTNINPNTAAQNAVKNLISCGVTKG 178

  Fly   166 ELSEDYALIAGSQVISTQSPGLTLYNEIQEWPHW 199
            .:...|.|.....|.||:.||.|.||.::.||.:
 Frog   179 YIKSTYILKGHRNVGSTECPGNTFYNTVKTWPRF 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SANP_572727.1 PGRP 38..179 CDD:128941 55/140 (39%)
pglyrp1XP_012823786.1 PGRP 51..192 CDD:128941 55/140 (39%)

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