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Protein Alignment PGRP-SA and Pglyrp3
DIOPT Version :9
| Sequence 1: | NP_001285128.1 |
Gene: | PGRP-SA / 32099 |
FlyBaseID: | FBgn0030310 |
Length: | 203 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001178890.1 |
Gene: | Pglyrp3 / 499658 |
RGDID: | 1593164 |
Length: | 339 |
Species: | Rattus norvegicus |
| Alignment Length: | 167 |
Identity: | 71/167 - (42%) |
| Similarity: | 106/167 - (63%) |
Gaps: | 9/167 - (5%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 37 CPTIKLKRQWGGKPS----LGLHYQVRPIRYVVIHHTVTGECSGLLKCAEILQNMQAYHQNELDF 97
||.|..:..|..:.: :.| |.::|:|.||....|:....|...:::.|::|.::.||
Rat 176 CPNIIPRTAWEARETHCSQMNL-----PAKFVIIIHTAGESCNESADCLIRVRDTQSFHMDKQDF 235
Fly 98 NDISYNFLIGNDGIVYEGTGWGLRGAHTYGYNAIGTGIAFIGNFVDKLPSDAALQAAKDLLACGV 162
.||:|:||:|.||:||||.||.:.|:||||||.|..||||:||||:|.|::|:|:||:.|:.|.|
Rat 236 CDIAYHFLVGQDGVVYEGVGWTIEGSHTYGYNDIALGIAFMGNFVEKPPNEASLEAAQSLIQCAV 300
Fly 163 QQGELSEDYALIAGSQVISTQSPGLTLYNEIQEWPHW 199
..|.|:.:|.|:..|.|.:..|||..|||.|:.|||:
Rat 301 AMGYLASNYLLMGHSDVSNILSPGQALYNIIKTWPHF 337
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| PGRP-SA | NP_001285128.1 |
PGRP |
38..179 |
CDD:128941 |
59/144 (41%) |
| Pglyrp3 | NP_001178890.1 |
PGRP |
19..152 |
CDD:128941 |
|
| PGRP |
177..317 |
CDD:128941 |
59/144 (41%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
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