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Protein Alignment PGRP-SA and PGRP-SC1b
DIOPT Version :9
Sequence 1: | NP_001285128.1 |
Gene: | PGRP-SA / 32099 |
FlyBaseID: | FBgn0030310 |
Length: | 203 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001286209.1 |
Gene: | PGRP-SC1b / 35861 |
FlyBaseID: | FBgn0033327 |
Length: | 185 |
Species: | Drosophila melanogaster |
Alignment Length: | 190 |
Identity: | 73/190 - (38%) |
Similarity: | 102/190 - (53%) |
Gaps: | 12/190 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 IGLVLLLLAFVSAGKSRQRSPANCPTIKLKRQWGG---KPSLGL-HYQVRPIRYVVIHHTVTGEC 74
:..|.||||.:...:.. |....:..|.:||| |.::|| :| :.|.:||||....|
Fly 2 VSKVALLLAVLVCSQYM----AQGVYVVSKAEWGGRGAKWTVGLGNY----LSYAIIHHTAGSYC 58
Fly 75 SGLLKCAEILQNMQAYHQNELDFNDISYNFLIGNDGIVYEGTGWGLRGAHTYGYNAIGTGIAFIG 139
....:|..:||::|.||.:.|.:.||.||||||.||.||||.||...|||...:|....||:|:|
Fly 59 ETRAQCNAVLQSVQNYHMDSLGWPDIGYNFLIGGDGNVYEGRGWNNMGAHAAEWNPYSIGISFLG 123
Fly 140 NFVDKLPSDAALQAAKDLLACGVQQGELSEDYALIAGSQVISTQSPGLTLYNEIQEWPHW 199
|:.........:.||:.||...|.:|:||..|.|....||.:|:.||..::|||:.|.||
Fly 124 NYNWDTLEPNMISAAQQLLNDAVNRGQLSSGYILYGHRQVSATECPGTHIWNEIRGWSHW 183
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SA | NP_001285128.1 |
PGRP |
38..179 |
CDD:128941 |
56/144 (39%) |
PGRP-SC1b | NP_001286209.1 |
PGRP |
22..163 |
CDD:128941 |
56/144 (39%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45440244 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm44042 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101717 |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11022 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X1649 |
|
7 | 6.840 |
|
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