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Protein Alignment PGRP-SA and Pglyrp4
DIOPT Version :9
Sequence 1: | NP_001285128.1 |
Gene: | PGRP-SA / 32099 |
FlyBaseID: | FBgn0030310 |
Length: | 203 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038958226.1 |
Gene: | Pglyrp4 / 310611 |
RGDID: | 1308520 |
Length: | 384 |
Species: | Rattus norvegicus |
Alignment Length: | 174 |
Identity: | 75/174 - (43%) |
Similarity: | 104/174 - (59%) |
Gaps: | 6/174 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 28 KSRQRSPANCPTIKLKRQWGGKPSLGLH--YQVRPIRYVVIHHTVTGECSGLLKCAEILQNMQAY 90
|.:|:..| ||.|..:..||.:.| | ....|.:|.:|.||....||...:|..::|::|::
Rat 213 KGKQKKAA-CPHIVPRSAWGARES---HCFKMTLPAKYAIILHTAGRTCSQPDECRLLIQDLQSF 273
Fly 91 HQNELDFNDISYNFLIGNDGIVYEGTGWGLRGAHTYGYNAIGTGIAFIGNFVDKLPSDAALQAAK 155
..:.|:..||.||||:|.||.||||.||..:|:.|.|||.|...|||:|.|....|:.||||||:
Rat 274 FMDRLNACDIGYNFLVGQDGGVYEGVGWNNQGSKTDGYNDIALSIAFMGIFTGSSPNAAALQAAQ 338
Fly 156 DLLACGVQQGELSEDYALIAGSQVISTQSPGLTLYNEIQEWPHW 199
||:.|.|.:|.|:.:|.|:..|.|.:|.|||..|||.|:.|||:
Rat 339 DLIQCAVVKGYLTPNYLLMGHSDVSNTLSPGQALYNIIKTWPHF 382
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SA | NP_001285128.1 |
PGRP |
38..179 |
CDD:128941 |
59/142 (42%) |
Pglyrp4 | XP_038958226.1 |
PGRP |
67..201 |
CDD:128941 |
|
PGRP |
222..362 |
CDD:128941 |
59/142 (42%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166345820 |
Domainoid |
1 |
1.000 |
129 |
1.000 |
Domainoid score |
I5121 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR11022 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
1 |
1.000 |
- |
- |
|
X1649 |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
7 | 6.950 |
|
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