DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-SA and Pglyrp3

DIOPT Version :10

Sequence 1:NP_572727.1 Gene:PGRP-SA / 32099 FlyBaseID:FBgn0030310 Length:203 Species:Drosophila melanogaster
Sequence 2:XP_006501534.1 Gene:Pglyrp3 / 242100 MGIID:2685266 Length:359 Species:Mus musculus


Alignment Length:167 Identity:72/167 - (43%)
Similarity:105/167 - (62%) Gaps:9/167 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 CPTIKLKRQWGGK----PSLGLHYQVRPIRYVVIHHTVTGECSGLLKCAEILQNMQAYHQNELDF 97
            ||.|..:..|..:    |.:.|     |.::|:|.||....|:....|...:::.|::|.:..||
Mouse   196 CPNITPRSAWEARETHCPQMNL-----PAKFVIIIHTAGKSCNESADCLVRVRDTQSFHIDNQDF 255

  Fly    98 NDISYNFLIGNDGIVYEGTGWGLRGAHTYGYNAIGTGIAFIGNFVDKLPSDAALQAAKDLLACGV 162
            .||:|:||:|.||.||||.||.:.|:||||||.|..||||:||||:|.|::|:|:||:.|:.|.|
Mouse   256 CDIAYHFLVGQDGEVYEGVGWNIEGSHTYGYNDIALGIAFMGNFVEKPPNEASLKAAQSLIQCAV 320

  Fly   163 QQGELSEDYALIAGSQVISTQSPGLTLYNEIQEWPHW 199
            .:|.|:.:|.|:..|.|.:..|||..|||.|:.|||:
Mouse   321 AKGYLTSNYLLMGHSDVSNILSPGQALYNIIKTWPHF 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-SANP_572727.1 PGRP 38..179 CDD:128941 60/144 (42%)
Pglyrp3XP_006501534.1 PGRP 40..172 CDD:128941
PGRP 197..337 CDD:128941 60/144 (42%)
Blue background indicates that the domain is not in the aligned region.

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