DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1572 and myadm

DIOPT Version :10

Sequence 1:NP_572726.1 Gene:CG1572 / 32098 FlyBaseID:FBgn0030309 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_001006800.1 Gene:myadm / 448507 XenbaseID:XB-GENE-966240 Length:307 Species:Xenopus tropicalis


Alignment Length:177 Identity:42/177 - (23%)
Similarity:70/177 - (39%) Gaps:45/177 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VTITRTTTSTTNTSYIVLNTGYLKTFPGILKLFELIIGASIVGILAFNYQDYHRYFYGQQDLFHY 69
            |::||......        |||:.|.||:||:.|..| |.|:.:...:...|.|:     |...:
 Frog   140 VSLTRAKPGEV--------TGYMATTPGLLKVLETFI-ACIIFVFISDPAQYERH-----DAMKW 190

  Fly    70 LMAV---TFMIGTFCLLLACLTSLSTGGIIAKTIYELIYHSVAAILILVSSTILL-LKLRDVKH- 129
            .:||   .|::....::| |:.. .||.:.......|..:::.|:|:..|:.|:. :...|.|| 
 Frog   191 CLAVYCICFILSIVVIIL-CVGE-CTGWLPCAFNKFLSGYALLAVLMYASAMIVWPIFAFDRKHG 253

  Fly   130 ----------------------DAYMAAGVLGLVNAVLYFISAFLAH 154
                                  |..:|..||..||.:.|.:.  |.|
 Frog   254 GTPSRPSYCRSGQGNLYRVCDWDKLVAVAVLTAVNLIAYIMD--LVH 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1572NP_572726.1 MARVEL 26..152 CDD:366555 35/152 (23%)
myadmNP_001006800.1 MARVEL 16..142 CDD:366555 1/1 (100%)
MARVEL 153..297 CDD:366555 35/153 (23%)

Return to query results.
Submit another query.