DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1572 and cmtm4

DIOPT Version :9

Sequence 1:NP_001285126.1 Gene:CG1572 / 32098 FlyBaseID:FBgn0030309 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_001002492.1 Gene:cmtm4 / 436765 ZFINID:ZDB-GENE-040718-195 Length:208 Species:Danio rerio


Alignment Length:146 Identity:32/146 - (21%)
Similarity:64/146 - (43%) Gaps:31/146 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YLKTFPGILKLFELIIGASIVGILAFNYQD-----------YHRYFYGQQDLFHYLMAVTFMIGT 79
            |||:..||||:.|:::     .:::|.:.:           |         ||.::....|::..
Zfish    49 YLKSHFGILKVIEVVL-----ALISFIFIETIMMCSPCAGVY---------LFEFVSCSAFVVTG 99

  Fly    80 FCLLLACLTSLSTGGIIAKTIYELIYHSVAAILILVSSTILLLKLRDVKHD--AYMAAGVLGLVN 142
            ..||:..|...:....|..::.:||..:.:.....::|.:|..    :.|.  |.:||.:.|.:.
Zfish   100 VLLLIFSLNLHTKVPHINWSLTDLINTATSTFFFFLASVVLAA----LNHQSGAEIAAVIFGFLV 160

  Fly   143 AVLYFISAFLAHRSYR 158
            ..:|.::.|||.|.:|
Zfish   161 MAVYALNTFLASRRWR 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1572NP_001285126.1 MARVEL 26..152 CDD:279608 27/138 (20%)
cmtm4NP_001002492.1 MARVEL 49..170 CDD:279608 27/138 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4788
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.