DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1572 and Myadml2

DIOPT Version :9

Sequence 1:NP_001285126.1 Gene:CG1572 / 32098 FlyBaseID:FBgn0030309 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_001121657.1 Gene:Myadml2 / 303744 RGDID:1311499 Length:307 Species:Rattus norvegicus


Alignment Length:152 Identity:32/152 - (21%)
Similarity:61/152 - (40%) Gaps:32/152 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YLKTFPGILKLFELIIGASIVGILAFNYQDYHRYFYGQQDLFHYLMAV---TFMIGTFCLLLACL 87
            |:.|..|:||:.:..:...|.|.|.      |...||:.....:.:||   .||.....::|:.:
  Rat   159 YMATVSGLLKIVQAFVACIIFGALV------HESRYGRYVATQWCVAVYSLCFMATVAVVVLSVM 217

  Fly    88 TSLSTGGI---IAKTIYELIYHSVAAILILVSSTILLLKLRDVKH----------------DAYM 133
            .  .|||:   ..:.:  ::|..:|.:|.|.::.|..:...|.|:                |:.:
  Rat   218 G--HTGGLGCPFDRLV--VVYTFLAVLLYLSAAVIWPVFCFDPKYGEPGRPSDCPRGSCPWDSQL 278

  Fly   134 AAGVLGLVNAVLYFISAFLAHR 155
            ...:...||.:||.:....:.|
  Rat   279 VVAIFTYVNLLLYIVDLAYSQR 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1572NP_001285126.1 MARVEL 26..152 CDD:279608 31/147 (21%)
Myadml2NP_001121657.1 MARVEL 17..148 CDD:279608
MARVEL 159..297 CDD:279608 31/147 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4788
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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