DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1572 and Cklf

DIOPT Version :10

Sequence 1:NP_572726.1 Gene:CG1572 / 32098 FlyBaseID:FBgn0030309 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_620811.1 Gene:Cklf / 245978 RGDID:620708 Length:151 Species:Rattus norvegicus


Alignment Length:117 Identity:23/117 - (19%)
Similarity:44/117 - (37%) Gaps:24/117 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 YIVLNTGYLKTFPGILKLFELIIGASIVGILAFNYQDYHR-YFYGQQDLFHYLMAVTFM--IGTF 80
            |||: ||           ||:.|...::.:...:.....| :|:...|:.:.::...||  :...
  Rat    45 YIVI-TG-----------FEVTIILFLIALYMCSLDKTMRSFFWPLLDVINSVVTTLFMLIVSVS 97

  Fly    81 CLLLACLTSLSTGGIIAKTIYELIYHSVAAILILVSSTILLLKLRDVKHDAY 132
            .|:....|.:..||         ::..:..|..:....::..|||...|..|
  Rat    98 ALIPETSTMIMVGG---------VFGFLTVICTVADCALMCQKLRFRPHGPY 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1572NP_572726.1 MARVEL 26..152 CDD:366555 18/110 (16%)
CklfNP_620811.1 MARVEL 13..127 CDD:366555 18/102 (18%)

Return to query results.
Submit another query.