DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Drak and camk4

DIOPT Version :9

Sequence 1:NP_001162723.1 Gene:Drak / 32097 FlyBaseID:FBgn0052666 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001017607.1 Gene:camk4 / 550270 ZFINID:ZDB-GENE-050417-76 Length:364 Species:Danio rerio


Alignment Length:360 Identity:107/360 - (29%)
Similarity:165/360 - (45%) Gaps:80/360 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EIYEVEQTPFARGKFAAVRRAIHKNTGSHFAAKFLKRRRRAQSSDKEI-KHEIAVLMLCEGEDNI 97
            :.||:| :...||..:.|.|...|.|..|:|.|.||:     :.||:| :.||.||:.. ...||
Zfish    27 DFYELE-SELGRGATSVVYRCRQKGTQKHYAVKMLKK-----TVDKKIVRTEIGVLLRL-SHPNI 84

  Fly    98 VNLNAVHETRSDTALLLELATGGELQTILDNEECLTEAQARHCMREVLKALKFLHDRSIAHLDLK 162
            :.|..:.||.::.:|:|||.|||||...:..:...:|..|...:::||:|:.:||:..:.|.|||
Zfish    85 IKLKEIFETPAEISLVLELVTGGELFDRVVEKGYYSERDAADAVKQVLEAVAYLHENGVVHRDLK 149

  Fly   163 PQNILLAGERIEDGLKLCDFGISRVVCEGINVREMAGTPDYVAPEVLQ---YEPLSLLTDIWSVG 224
            |:|:|.|....:..||:.|||:|::|.:.:.::.:.|||.|.|||:|:   |.|   ..|:||||
Zfish   150 PENLLYATSAPDAPLKIADFGLSKIVDDQVTMKTVCGTPGYCAPEILRGCAYGP---EVDMWSVG 211

  Fly   225 VLTYVLLSGFSPFGGDT-KQETFLNISQCALTFPDNLFGGVSPVAIDFIRRALRIKPNDRMNATG 288
            |:||:||.||.||..|. .|..|..|..|...|....:..||..|.|.:::.:...|..|:....
Zfish   212 VITYILLCGFEPFFDDRGDQYMFKRILNCEYEFVSPWWDNVSLNAKDLVKKLIVQDPKKRLTTQQ 276

  Fly   289 CLDHIWL---------------------------------------------------KDDCSLD 302
            .|.|.|:                                                   |.|||  
Zfish   277 ALQHPWVTGKAVNFTHMDTAQKKLLEFNARRKLKAAVKAVVASSRLGSAGSHGNPDGNKGDCS-- 339

  Fly   303 RQIYLQPQSDAEEEEEEDVDDDVEDEEEEEQVEEE 337
                   .|..:|:..||     :.:.|:.|::.|
Zfish   340 -------SSSIKEKTAED-----QPDTEQPQIQNE 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrakNP_001162723.1 STKc_DRAK 28..295 CDD:271008 95/265 (36%)
S_TKc 45..295 CDD:214567 92/254 (36%)
PHA03255 379..>554 CDD:165513
camk4NP_001017607.1 STKc_CaMKIV 25..318 CDD:270987 96/300 (32%)
Pkinase 29..283 CDD:278497 95/263 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.