DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba5 and uba3

DIOPT Version :10

Sequence 1:NP_572722.2 Gene:Uba5 / 32094 FlyBaseID:FBgn0030305 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_998632.1 Gene:uba3 / 406776 ZFINID:ZDB-GENE-040426-2825 Length:462 Species:Danio rerio


Alignment Length:340 Identity:73/340 - (21%)
Similarity:122/340 - (35%) Gaps:108/340 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 VAIVGVGGVGSVTADMLTRCGIGKLILFDYDKVELANMNRLF-FTPDQAGLSKVAAAAATLSFIN 139
            :.::|.||:|......|...|...:.:.|.|.::::|:||.| |.|...|..|...||   .|:|
Zfish    71 ILVIGAGGLGCELLKDLALSGFRHIHVVDMDTIDVSNLNRQFLFRPKDVGRPKAEVAA---DFVN 132

  Fly   140 ---PDVEIETHNYNITTV-ENFDRFLDTISQGGRIAGQPVDLVLSCVDNFEARMAINAACNERNL 200
               |...:..|...|..: |.|.|              ...:|:..:|:..||..:|...  .:|
Zfish   133 DRVPGCSVVPHFKKIQDLDETFYR--------------QFHIVVCGLDSVIARRWMNGML--LSL 181

  Fly   201 NWFESGVSE------------NAVSGHIQFIRPGDTACFACA----PPLVVAENIDEKTLKREGV 249
            ..:|.||.:            ....|:.:.|.||.|||..|.    ||.:   |....|:     
Zfish   182 LIYEDGVLDPSSIIPLIDGGTEGFKGNARVILPGMTACIDCTLELYPPQI---NFPMCTI----- 238

  Fly   250 CAASLPTTMGITAGFLVQNALKYLLNFGEVSDYLGYNALSDFFPKMTLKPNPQCDDRNCLVRQKE 314
              ||:|.        |.::.::|:                    :|.|.|           ::|.
Zfish   239 --ASMPR--------LPEHCVEYV--------------------RMLLWP-----------KEKP 262

  Fly   315 FQARPKPVLIEEKAVSEEPLHATNEWGIELVAEDAPESNTTPAETPVMGEGLRLAYEAPEK---S 376
            |   ...|:::    .::|.|.  :|..:...|.|.|.|.|       |...||.....::   :
Zfish   263 F---GDGVVLD----GDDPKHI--QWVYQKSLERAAEFNIT-------GVTYRLTQGVVKRIIPA 311

  Fly   377 SETSEETVSAATADE 391
            ..::...::||.|.|
Zfish   312 VASTNAVIAAACATE 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba5NP_572722.2 ThiF_MoeB_HesA_family 52..297 CDD:238386 53/241 (22%)
uba3NP_998632.1 Interaction with ube2m N-terminus. /evidence=ECO:0000250 52..69
Uba3_RUB 70..367 CDD:238765 73/340 (21%)
Interaction with ube2m N-terminus. /evidence=ECO:0000250 156..160 1/17 (6%)
Interaction with ube2m N-terminus. /evidence=ECO:0000250 191..216 3/24 (13%)
Interaction with nedd8. /evidence=ECO:0000250 226..228 0/1 (0%)
Interaction with nae1. /evidence=ECO:0000250 241..247 2/13 (15%)
Interaction with nae1. /evidence=ECO:0000250 291..294 1/2 (50%)
Interaction with ube2m N-terminus. /evidence=ECO:0000250 330..337
Interaction with nedd8. /evidence=ECO:0000250 351..356
Interaction with ube2m core domain. /evidence=ECO:0000250 367..462
E2_bind 377..460 CDD:462611
Blue background indicates that the domain is not in the aligned region.

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