DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba5 and Uba2

DIOPT Version :10

Sequence 1:NP_572722.2 Gene:Uba5 / 32094 FlyBaseID:FBgn0030305 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001094049.1 Gene:Uba2 / 308508 RGDID:1312023 Length:639 Species:Rattus norvegicus


Alignment Length:220 Identity:59/220 - (26%)
Similarity:88/220 - (40%) Gaps:57/220 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 VAIVGVGGVGSVTADMLTRCGIGKLILFDYDKVELANMNRLF-FTPDQAGLSKVAAAAATLSFIN 139
            |.:||.||:|......|...|...:.|.|.|.::::|:||.| |.....|.||...|..::...:
  Rat    20 VLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFH 84

  Fly   140 PDVEIETHNYNIT----TVENFDRFLDTISQGGRIAGQPVDLVLSCVDNFEARMAINAACNERNL 200
            |...||.|:.:|.    .||.|.:|:               ||::.:||..||..:|..|...::
  Rat    85 PQANIEAHHDSIMNPDYNVEFFRQFI---------------LVMNALDNRAARNHVNRMCLAADV 134

  Fly   201 NWFESGVSENAVSGHIQFIRPGDTACFACAPPLVVAENIDEKTLKREGVCAASLPTTMGITAGFL 265
            ...|||.:  ...|.:..|:.|.|.|:.|.|          |..:|      :.|       |..
  Rat   135 PLIESGTA--GYLGQVTTIKKGVTECYECHP----------KPTQR------TFP-------GCT 174

  Fly   266 VQNA----------LKYLLN--FGE 278
            ::|.          .|||.|  |||
  Rat   175 IRNTPSEPIHCIVWAKYLFNQLFGE 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba5NP_572722.2 ThiF_MoeB_HesA_family 52..297 CDD:238386 59/220 (27%)
Uba2NP_001094049.1 Uba2_SUMO 19..443 CDD:238766 59/220 (27%)
UBA_E1_SCCH 179..361 CDD:463157 7/21 (33%)
UAE_UbL 451..537 CDD:464286
UBA2_C 548..633 CDD:465058
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.