DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43155 and Kcns3

DIOPT Version :10

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_113966.2 Gene:Kcns3 / 83588 RGDID:621527 Length:491 Species:Rattus norvegicus


Alignment Length:215 Identity:48/215 - (22%)
Similarity:89/215 - (41%) Gaps:45/215 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LEKLKHLDRRVD--AAEGGGLA-----KGTAGGRRSTACWQSMKWKSALNHIGLLVSLSIYCGVG 79
            :.:.::.|..||  ..||..:|     .|....|...|..|...||:.||.|..:..:..|..:.
  Rat   207 MSEFQNEDGEVDDPVLEGVEIACIAWFTGELAIRLVAAPSQKKFWKNPLNIIDFVSIIPFYATLA 271

  Fly    80 GLIFRHLERPAEVERLSHLKDIVKTHR-ERFL----HTI----LNNTEVHNLDEL------LSFE 129
              :....|...::|.:..:..|::..| .|.|    |::    |..|..|:..|:      ||..
  Rat   272 --VDTKEEESEDIENMGKVVQILRLMRIFRILKLARHSVGLRSLGATLRHSYHEVGLLLLFLSVG 334

  Fly   130 LAKYEAAVQQAAEGGLLIVADKDFPEPYERWSILQAV----FFSSTVLTTIGYGNIVPVTTGGRV 190
            ::.:..         |:...:||     |..|.|.::    ::::..:||:|||:..|||..|::
  Rat   335 ISIFSV---------LIYSVEKD-----ELASSLTSIPICWWWATISMTTVGYGDTHPVTLAGKI 385

  Fly   191 F---CICFALIGIPFTLTVI 207
            .   ||...::.:...:|:|
  Rat   386 IASTCIICGILVVALPITII 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 143..214 CDD:462301 19/72 (26%)
Ion_trans_2 <267..319 CDD:462301
Kcns3NP_113966.2 BTB_POZ_KCNS3 15..122 CDD:349735
Ion_trans 184..417 CDD:459842 48/215 (22%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 370..375 3/4 (75%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.