DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43155 and KCO1

DIOPT Version :9

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_200374.1 Gene:KCO1 / 835657 AraportID:AT5G55630 Length:363 Species:Arabidopsis thaliana


Alignment Length:86 Identity:29/86 - (33%)
Similarity:40/86 - (46%) Gaps:11/86 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 FLGVYLAAGAGLLLLWEDDWT------FFDGFYFCFITMTTIGFGDLVPKKPNYMLLCTLYILIG 306
            ||.:||..|.....|..|..:      ..|..|||.:||||:|:|||||......||...::..|
plant    82 FLALYLTIGTLCFYLVRDQISGHKTSGVVDALYFCIVTMTTVGYGDLVPNSSASRLLACAFVFSG 146

  Fly   307 LALTSTIIE-----LVRRQYA 322
            :.|...::.     ||.:|.|
plant   147 MVLVGHLLSRAADYLVEKQEA 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 <157..214 CDD:285168
Ion_trans <240..314 CDD:278921 25/71 (35%)
Ion_trans_2 <266..319 CDD:285168 20/63 (32%)
KCO1NP_200374.1 Ion_trans_2 81..163 CDD:400301 26/80 (33%)
Ion_trans_2 202..277 CDD:400301
FRQ1 <235..353 CDD:227455
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 51 1.000 Domainoid score I4317
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D774951at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.010

Return to query results.
Submit another query.