DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43155 and kcna6a

DIOPT Version :10

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001124098.1 Gene:kcna6a / 795490 ZFINID:ZDB-GENE-080722-21 Length:475 Species:Danio rerio


Alignment Length:226 Identity:50/226 - (22%)
Similarity:80/226 - (35%) Gaps:91/226 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LLVSLSIYCGVGGLIFRHLER------PA----EVERLSHLKD---IVKT--------------- 104
            :|:|:.|:|......||..:|      ||    .|:|||...|   :::|               
Zfish   171 ILISIIIFCIETLPEFREDDRVFDNHLPANSTTSVQRLSAYTDPFFLLETICIVWFCFELFIRFL 235

  Fly   105 ---HRERFLHTILNNTEVHNLDE---LLSFELAKYEAAVQQAA---------------------- 141
               .:..|...|:|..::..:..   .||.||.:.::..||..                      
Zfish   236 ACPSKPTFFKDIMNTIDIVAIMPYFITLSLELGEVQSNQQQTTSLAILRVIRLVRVFRIFKLSRH 300

  Fly   142 ----------------EGGLLI---------------VADKDFPEPYERWSILQAVFFSSTVLTT 175
                            |.||||               .|:.|.||. ...||..|.:::...:||
Zfish   301 SKGLQILGQTLRASMRELGLLIFFLIIGIILFSSAVYFAEADDPET-SFTSIPDAFWWAVVSMTT 364

  Fly   176 IGYGNIVPVTTGGRVFCICFALIGIPFTLTV 206
            :|||::.|||.||::.....|:.|:   ||:
Zfish   365 VGYGDMYPVTIGGKIVGSMCAIAGV---LTI 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 143..214 CDD:462301 25/79 (32%)
Ion_trans_2 <267..319 CDD:462301
kcna6aNP_001124098.1 BTB_POZ 31..157 CDD:453885
Ion_trans 203..411 CDD:459842 41/194 (21%)
Blue background indicates that the domain is not in the aligned region.

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